Bioconductor Scrna

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DESeq2 Scrna scRNAseq

2.8 years ago RDoc ▴ 10

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DropletUtils emptyDrops scRNA scRNAseq 10x

21 months ago Peter Hickey ▴ 740

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1.7k

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scRNA zinbwave batch IntegratedData

updated 3.6 years ago by davide risso ▴ 950 • written 3.6 years ago by Assa Yeroslaviz ★ 1.5k

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scRNAseq scrna paireddesign edgeR pseudobulking

updated 9 months ago by Gordon Smyth 50k • written 9 months ago by garcia • 0

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1.5k

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scrna scrnaseq differential gene expression

updated 6.5 years ago by davide risso ▴ 950 • written 6.5 years ago by d.depledge • 0

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1.7k

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Seurat scRNA debugging exceptions unit-test

updated 4.5 years ago by Martin Morgan 25k • written 4.5 years ago by moldach ▴ 20

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1.5k

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scater scrna

updated 7.3 years ago by Aaron Lun ★ 28k • written 7.3 years ago by hrishi27n ▴ 20

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834

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scRNAseq quickcluster scRNA scran

5 months ago ruba-mahmoud • 0

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686

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scrna scRNAseq

updated 6 months ago by Gabriella • 0 • written 14 months ago by sarah.jobbins • 0

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901

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SCRNA

updated 6.6 years ago by Aaron Lun ★ 28k • written 6.6 years ago by sumetha • 0

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4.2k

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MAST scRNA GSEA

updated 6.8 years ago by Andrew_McDavid ▴ 270 • written 6.8 years ago by siajunren • 0

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420

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scRNA scRNAseq

updated 9 months ago by ATpoint ★ 4.1k • written 9 months ago by Omer • 0

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scRNAseq scRNA batchelor BatchEffect

updated 3.5 years ago by Aaron Lun ★ 28k • written 3.5 years ago by Adrien • 0

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4.7k

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scRNA monocle packages Tutorial

4.7 years ago 444579004 • 0

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678

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scran Normalization scRNA BatchEffect

16 months ago r_grau ▴ 10

15 results • Page 1 of 1

Recent ...

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Comment: Extremely small p-values using Limma for proteomic data by James W. MacDonald 65k

If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>

Comment: How to use spike-in information (sequences from another species) with DESeq2::DE by maria.soler • 0

Hi, I have a question barely related to this topic. Do you use a custom reference genome combining your organism and the one used as a spik…

Answer: Differential gene expression analysis results by ATpoint ★ 4.1k

Pease do not open multiple posts for the same issue: https://support.bioconductor.org/p/9158194/#9158222 The support site is not meant f…

Comment: deseq2 results by sajadahmad41454 • 0

thank you for your response, should i remove or discard that sample? since the red outlier on left represents one of healthy samples.

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Comment: Log-cpm values from limma

Comment: deseq2 results

Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie

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