Bioconductor TFBSTools

Showing : TFBSTools • reset

votes

1.1k

views

TFBSTools R forloop

updated 4.0 years ago by onlineclasshelpnow • 0 • written 4.0 years ago by HELEN • 0

votes

replies

1.1k

views

TFBSTools FASTA RStudio

4.0 years ago HELEN • 0

votes

1.4k

views

TFBSTools DNASeqData readFASTA DNA RStudio

updated 4.0 years ago by James W. MacDonald 68k • written 4.0 years ago by HELEN • 0

votes

replies

1.3k

views

error TFBSTools R

4.0 years ago HELEN • 0

votes

replies

947

views

TFBSTools RStudio R

4.0 years ago HELEN • 0

votes

2.9k

views

pwm tfbstools jaspar

updated 8.1 years ago by Ge Tan ▴ 20 • written 8.1 years ago by chrisclarkson100 ▴ 50

vote

2.7k

views

TFBSTools looping PFMatrixList PFMatrix bioconductor

8.5 years ago nathan.lawlor03 • 0

votes

1.4k

views

bioconductor tfbstools

updated 9.0 years ago by Ge Tan ▴ 20 • written 9.0 years ago by laurabuggiotti • 0

votes

1.9k

views

tfbstools jaspar

updated 10.1 years ago by Ge Tan ▴ 20 • written 10.1 years ago by JasonLouisStein • 0

votes

1.7k

views

tfbstools

updated 10.4 years ago by Ge Tan ▴ 20 • written 10.6 years ago by franceskrussell • 0

10 results • Page 1 of 1

Recent ...

Replies

Answer: Question about collapsing ASVs by genus level during DESeq2 analysis by Michael Love 43k

I'll just note that microbiome stats folks tend to use other tools than DESeq2. > several ASVs belong to the same genus but are not iden…

Comment: Integration: Paired-end vs healthy single-end from a different source by igkryycpinmshzugby • 0

Yes, Option 1 (technical homogenization) reprocessing paired-end samples as single-end using only R1 is the most defensible approach when l…

Answer: Integration: Paired-end vs healthy single-end from a different source by James W. MacDonald 68k

If by reprocess you mean generate libraries and re-sequence, then that's something you could do. Otherwise the biological and technical dif…

Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k

I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112

Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k

we can investigate this issue. thank you for bringing it to our attention

Votes

Bioconductor 3.22 Released!

Comment: "Watched Tags" are being erased rather than updated

Comment: deseq2 filter the low counts

Answer: DESeq2 interactions

Awards • All

Popular Question to Fred Hutch (Recruiting) ▴ 40