Showing : XVector • reset
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Looking for the source for IRanges 2.8.1, S4Vectors 0.12.1 and XVector 0.14.0
bioconductor iranges s4vectors xvector r 3.3.2
updated 5.8 years ago by ▴ 10 • written 5.8 years ago by • 0
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4
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2.7k
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XVector installation fails because zlib.h is not found
XVector docker Install
2.4 years ago RobKo ▴ 10
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7
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2.1k
views
VariantTools installation problem: dependencies not available
IRanges GenomicRanges VariantTools XVector IRanges GenomicRanges VariantTools XVector
updated 10.5 years ago by ★ 11k • written 10.5 years ago by ▴ 360
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5
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2.2k
views
Problem installing XVector package
software error gcrma Xvector iranges
7.7 years ago gary_smith • 0
0
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2
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1.2k
views
VariantAnnotation::locateVariants error coming from XVector
variantannotation xvector iranges
5.9 years ago Vivek.b ▴ 100
1
vote
6
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4.4k
views
ERROR: compilation failed for package XVector
XVector XVector
updated 10.8 years ago by 16k • written 10.8 years ago by ▴ 60
2
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5
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4.4k
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How to use subSeq with DNAStringSet and information of GroupedIRanges?
subseq Xvector dnastringset
updated 6.9 years ago by 16k • written 6.9 years ago by • 0
2
votes
2
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2.0k
views
Error in installation of scran
S4Vectors IRanges XVector GenomicRanges scran
updated 5.3 years ago by ★ 28k • written 5.3 years ago by • 0
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0
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1.1k
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回复： XVector
Network Cancer IRanges XVector
9.6 years ago Hervé Pagès 16k
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0
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1.3k
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XVector
Cancer XVector
9.6 years ago Hervé Pagès 16k
2
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1
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689
views
is check=FALSE safe in compact()?
XVector
updated 3.2 years ago by 25k • written 3.2 years ago by ▴ 20
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0
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849
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Suggestion for a regression test in XVector
xvector
7.0 years ago Charles Plessy ▴ 180
0
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3
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674
views
Extracting values from out-of-bounds Rle Views
IRanges XVector AtomicList
written 22 months ago by ▴ 20
13 results • Page 1 of 1
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Comment: Deseq2. decontXcounts not integers. Useful alternative? by camp ▴ 10
Yes, @atpoint is correct. decontX decontaminated counts are not integers due to the way the variation inference algorithm works, but you ca…
Comment: Deseq2. decontXcounts not integers. Useful alternative? by ATpoint ★ 4.0k
I do not know this decontamination tool you use but generally: If these counts are basically "corrected" raw counts in the sense that they'…
Answer: Improving the design matrices vignette in RNAseq123 by Gordon Smyth 50k
Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2) by winwater0928 • 0
Thank you for your comment! I'll review my code from top to bottom.
Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Votes
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
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