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Xvector
•
reset
0
votes
3
replies
920
views
Extracting values from out-of-bounds Rle Views
IRanges
XVector
AtomicList
written 2.8 years ago by
Pierre-Luc Germain
▴ 20
5
votes
4
replies
4.6k
views
XVector installation fails because zlib.h is not found
XVector
docker
Install
3.4 years ago • updated 3.3 years ago
RobKo
▴ 10
2
votes
1
reply
901
views
is check=FALSE safe in compact()?
XVector
updated 4.1 years ago by
Martin Morgan
25k • written 4.1 years ago by
robmaz77
▴ 20
2
votes
2
replies
2.5k
views
Error in installation of scran
S4Vectors
IRanges
XVector
GenomicRanges
scran
updated 6.2 years ago by
Aaron Lun
★ 28k • written 6.2 years ago by
Momo
• 0
0
votes
15
replies
2.6k
views
Looking for the source for IRanges 2.8.1, S4Vectors 0.12.1 and XVector 0.14.0
bioconductor
iranges
s4vectors
xvector
r 3.3.2
updated 6.7 years ago by
becker.gabriel
▴ 10 • written 6.7 years ago by
chokoiboko
• 0
0
votes
2
replies
1.5k
views
VariantAnnotation::locateVariants error coming from XVector
variantannotation
xvector
iranges
6.8 years ago
Vivek.b
▴ 100
2
votes
5
replies
5.2k
views
How to use subSeq with DNAStringSet and information of GroupedIRanges?
subseq
Xvector
dnastringset
updated 7.8 years ago by
Hervé Pagès
16k • written 7.9 years ago by
Sophie
• 0
0
votes
0
replies
1.0k
views
Suggestion for a regression test in XVector
xvector
7.9 years ago
Charles Plessy
▴ 180
0
votes
5
replies
2.6k
views
Problem installing XVector package
software error
gcrma
Xvector
iranges
8.6 years ago
gary_smith
• 0
0
votes
0
replies
1.3k
views
回复: XVector
Network
Cancer
IRanges
XVector
10.5 years ago
Hervé Pagès
16k
0
votes
0
replies
1.5k
views
XVector
Cancer
XVector
10.5 years ago
Hervé Pagès
16k
0
votes
7
replies
2.5k
views
VariantTools installation problem: dependencies not available
IRanges
GenomicRanges
VariantTools
XVector
IRanges
GenomicRanges
VariantTools
XVector
updated 11.4 years ago by
Michael Lawrence
★ 11k • written 11.4 years ago by
heyi xiao
▴ 360
1
vote
6
replies
5.2k
views
ERROR: compilation failed for package XVector
XVector
XVector
updated 11.7 years ago by
Hervé Pagès
16k • written 11.7 years ago by
Pengcheng Yang
▴ 60
13 results • Page
1 of 1
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Comment: Annotation package for Manduca sexta
by
GA
▴ 10
Thank you!
Comment: Improving performance of edgeR and limma while adjusting for multiple confounder
by
ATpoint
★ 4.8k
If 2 minutes is inacceptable to you then you can still fall back to limma-trend which should give a dramatic speedup and finish in seconds.…
Comment: getBM from biomaRt inconsistencies found with .gtf files across multiple species
by
Mike Smith
★ 6.6k
Great, thanks for the update from Ensembl. So the most relevant part of 'Location: Scaffold HG1277_PATCH: 137,021-141,806 forward strand' …
Answer: Improving performance of edgeR and limma while adjusting for multiple confounder
by
Gordon Smyth
52k
We recommend that you use voomLmFit() instead of voom+lmFit. We are pretty proud of the speed of glmQLFit and voom, and we hadn't expected…
Answer: Merging EPICV1 and V2 betas
by
James W. MacDonald
68k
It appears that [SeSAMe][1] has functions meant to do that sort of thing. [1]: https://bioconductor.org/packages/release/bioc/vignet…
Votes
Looking for equivalent EPIC chip v1 vs. v2 annotation variables
Properly constructing a hypergeometric test
A: Is logFC a log2 fold change or some other base in scran::findMarkers
Comment: Error in retrieving clinical data
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