Showing : affy • reset
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Some Genefilter questions
GO Survival cdf genefilter geneplotter tkWidgets affy affydata widgetTools gcrma affyPLM
updated 19.0 years ago by ★ 5.5k • written 19.0 years ago by ▴ 460
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2
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Problems with Affy names / BGA
Classification affy made4 Classification affy made4
updated 19.0 years ago by ▴ 510 • written 19.0 years ago by ▴ 310
0
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6
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1.9k
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biomart scripting help
probe affy probe affy
updated 19.0 years ago by ▴ 380 • written 19.0 years ago by ▴ 320
0
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5
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2.2k
views
error coercing an exprSet to ExpressionSet
GO cdf Biobase annotate multtest affy limma RBGL GOstats Category affycoretools GO cdf
updated 19.0 years ago by ★ 7.4k • written 19.0 years ago by ▴ 890
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0
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1.3k
views
help with RankProd plaase
GO Survival cdf genefilter multtest affy limma RankProd Category affycoretools GO cdf
19.0 years ago Kimpel, Mark W ▴ 890
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1
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1.1k
views
gcrma on PM-only Affy data
probe affy gcrma probe affy gcrma
updated 19.0 years ago by ▴ 200 • written 19.0 years ago by ★ 2.2k
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2
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1.8k
views
results of justPlier vs. RMA
Clustering affy plier affyio Clustering affy plier affyio
updated 19.0 years ago by ▴ 120 • written 19.0 years ago by ▴ 360
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0
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955
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Bioconductor Digest, Vol 45, Issue 9
affy simpleaffy affyio affy simpleaffy affyio
19.0 years ago Dick Beyer ★ 1.4k
0
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5
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2.2k
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Importing CDF file for custom array using makecdfenv
Microarray GO Survival Cancer cdf Biobase annotate genefilter affy graph makecdfenv GO
updated 19.0 years ago by ▴ 20 • written 19.0 years ago by ★ 2.2k
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0
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1.2k
views
simpleaffy gives error: unable to find an inherited method for function "pData"
affy simpleaffy affyio affy simpleaffy affyio
19.0 years ago Dick Beyer ★ 1.4k
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0
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1.5k
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microarray analysis of a dose response * strain experiment
Microarray affy limma maSigPro DOSE BRAIN Microarray affy limma maSigPro DOSE BRAIN
19.0 years ago Naomi Altman ★ 6.0k
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4
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microarray analysis of a dose response * strain experiment
affy DOSE BRAIN affy DOSE BRAIN
updated 19.0 years ago by 21k • written 19.0 years ago by ▴ 890
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0
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problems with Affy vignette and affybatch objects
GO Survival cdf Biobase annotate genefilter multtest affy affydata graph limma gcrma
19.0 years ago Martin Morgan 25k
0
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4
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1.6k
views
problems with Affy vignette and affybatch objects
GO Survival cdf Biobase annotate genefilter multtest reposTools affy affydata graph GO
updated 19.0 years ago by 25k • written 19.0 years ago by ★ 2.2k
0
votes
2
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1.4k
views
beadarray example data problem
Biobase affy affyio beadarray Biobase affy affyio beadarray
19.1 years ago • updated 19.0 years ago Keith Satterley ▴ 450
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3
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1.4k
views
beadarray example data problem 2
Biobase affy affyio beadarray Biobase affy affyio beadarray
19.0 years ago Martin Morgan 25k
0
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1
reply
1.1k
views
Computing Copy Number from Affy 500K SNP Chips
affy affy
updated 19.0 years ago by ▴ 290 • written 19.0 years ago by ▴ 10
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0
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726
views
[Bioc-devel] I will succeed (hopefully) the installation of Bioconductor 2.0
probe affy oligo probe affy oligo
19.0 years ago Francois Pepin ★ 1.3k
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0
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problems reading Illumina files using BeadExplorer
affy widgetTools limma marray convert affyio BeadExplorer affy widgetTools limma marray
19.1 years ago Vitalina Komashko ▴ 10
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7
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2.1k
views
Assistance: mouse4302cdf installation
cdf affy cdf affy
updated 19.1 years ago by ▴ 10 • written 19.1 years ago by ▴ 20
0
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3
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1.6k
views
Spatial Correction
SNP Normalization affy oligo SNP Normalization affy oligo
updated 19.1 years ago by ▴ 120 • written 19.1 years ago by ▴ 170
0
votes
1
reply
1.1k
views
Mismatch probe handling for exon arrays
Cancer Breast probe affy plier Cancer Breast probe affy plier
updated 19.1 years ago by 68k • written 19.1 years ago by ▴ 310
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2
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1.7k
views
problem updating packages OCPlus and RSNper
affy limma affyio OCplus affy limma affyio OCplus
updated 19.1 years ago by 16k • written 19.1 years ago by ▴ 890
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0
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1.4k
views
bioMart 1.6.3 missing mysql=TRUE in useMart
Microarray Annotation GO annotate affy biomaRt genomes Microarray Annotation GO annotate
19.1 years ago mkeehan@lic.co.nz ▴ 10
0
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0
replies
1.7k
views
What to do with multiple probes in GSEA?
probe affy PROcess probe affy PROcess
19.1 years ago Dick Beyer ★ 1.4k
0
votes
1
reply
1.2k
views
Affymetrix exon arrays?
Normalization Cancer Breast cdf affy PROcess Normalization Cancer Breast cdf affy
updated 19.1 years ago by ▴ 20 • written 19.1 years ago by ▴ 310
0
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2
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1.1k
views
Normalization quality
Genetics Normalization affy Genetics Normalization affy
updated 19.1 years ago by 21k • written 19.1 years ago by ▴ 310
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3
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1.4k
views
boxplot of MM data and normalization
Normalization affy Normalization affy
19.1 years ago Shi, Tao ▴ 720
0
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3
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2.4k
views
Situation of the legend in the plotPCA of the affycoretools library
GO Survival cdf annotate genefilter multtest affy graph limma RBGL GOstats Category GO
updated 19.1 years ago by 68k • written 19.1 years ago by ▴ 350
0
votes
1
reply
845
views
normalize AffyBatch object by control spots?
affy limma affy limma
19.1 years ago Jenny Drnevich ★ 2.2k
0
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0
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630
views
CDF and annotation package for populus
Microarray GUI cdf affy Microarray GUI cdf affy
19.1 years ago 丁明全 ▴ 10
0
votes
2
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1.1k
views
cdfenv files ATTN: James McDonald
SNP cdf probe reposTools affy SNP cdf probe reposTools affy
updated 19.1 years ago by 68k • written 19.1 years ago by ▴ 20
0
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0
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1.2k
views
method for removing consistent technical bias?
affy affydata vsn limma gcrma matchprobes affyPLM affyio affy affydata vsn limma gcrma
19.2 years ago k. brand ▴ 420
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0
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views
4 replicates, of 3 tissues- one good hyb (2xreps), one bad hyb (2xreps). Best way forward?
qPCR affy affydata vsn limma gcrma matchprobes affyPLM affyio BRAIN qPCR affy affydata
19.2 years ago k. brand ▴ 420
0
votes
1
reply
883
views
drosphila2PATH question
Pathways affy Pathways affy
updated 19.2 years ago by ▴ 870 • written 19.2 years ago by ▴ 170
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2
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2.1k
views
summarizing probe intensites before or after normalization- 1. how to do with RMA 2. Opinions?
Microarray Normalization Preprocessing Cancer probe affy convert affyio Microarray Cancer
19.2 years ago James W. MacDonald 68k
0
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3
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1.4k
views
summarizing probe intensites before or after normalization- 1. how to do with RMA 2. Opinions?
Normalization probe affy affyio Normalization probe affy affyio
updated 19.2 years ago by ★ 1.2k • written 19.2 years ago by ▴ 420
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1
reply
1.6k
views
R: Degradation plots - Affy package
Transcription qPCR Genetics probe affy Transcription qPCR Genetics probe affy
updated 19.2 years ago by ▴ 360 • written 19.2 years ago by ▴ 10
0
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3
replies
1.6k
views
Bioconductor installation problem on Mac
affy affy
updated 19.2 years ago by ▴ 310 • written 19.2 years ago by ▴ 30
0
votes
1
reply
1.3k
views
new user trying to create a cdf package for custom array
cdf probe affy makecdfenv cdf probe affy makecdfenv
updated 19.2 years ago by 68k • written 19.2 years ago by ▴ 20
0
votes
1
reply
928
views
Bioconductor installation problem
affy affy
updated 19.2 years ago by ★ 7.4k • written 19.2 years ago by ▴ 30
0
votes
1
reply
762
views
Affy High Throughput arrays
cdf probe affy gcrma cdf probe affy gcrma
updated 19.2 years ago by 68k • written 19.2 years ago by ▴ 10
0
votes
2
replies
2.9k
views
Importing CDF file for custom array using makecdfenv
cdf affy makecdfenv cdf affy makecdfenv
updated 19.2 years ago by ▴ 120 • written 19.2 years ago by ▴ 340
0
votes
2
replies
1.2k
views
RLMM questions
GO Classification cdf affy RLMM GO Classification cdf affy RLMM
updated 19.2 years ago by ★ 2.4k • written 19.2 years ago by ▴ 20
0
votes
2
replies
1.1k
views
Extracting pvals for PA calls in affy
probe affy probe affy
updated 19.2 years ago by ▴ 110 • written 19.2 years ago by ▴ 20
0
votes
2
replies
1.6k
views
Changing the value of sampleNames for exprSet
affy affyio affy affyio
updated 19.2 years ago by 25k • written 19.2 years ago by ▴ 110
0
votes
1
reply
1.1k
views
qc
Survival Biobase genefilter affy affydata affyPLM simpleaffy affyio Survival Biobase
updated 19.2 years ago by 68k • written 19.2 years ago by ▴ 10
0
votes
5
replies
2.3k
views
RMA and justRMA error
Cancer cdf Biobase affy gcrma affyio Cancer cdf Biobase affy gcrma affyio
19.2 years ago Aedin Culhane ▴ 510
0
votes
3
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1.3k
views
Genbank accessions for GOstuff
GO affy convert GO affy convert
updated 19.3 years ago by ▴ 870 • written 19.3 years ago by ▴ 50
0
votes
2
replies
835
views
combineAffyBatch problem
cdf affy matchprobes cdf affy matchprobes
updated 19.3 years ago by ★ 13k • written 19.3 years ago by ▴ 10
1,805 results • Page 20 of 37
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