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affyio
•
reset
0
votes
1
reply
265
views
Custom CDF creation for HTA 2.0 array using GTF annotation
oligo
oligoClasses
pdInfoBuilder
affycoretools
affyio
4 weeks ago
Seymoo
• 0
0
votes
3
replies
3.2k
views
*** caught segfault *** , cause 'memory not mapped'
affycoretools
FRMA
affyio
AffymetrixDataTestFiles
affy
updated 2.1 years ago by
James W. MacDonald
68k • written 2.1 years ago by
Seymoo
• 0
0
votes
1
reply
2.0k
views
gcrma background correction-saving output
cdf
affy
gcrma
matchprobes
affyio
cdf
affy
gcrma
matchprobes
affyio
updated 6.3 years ago by
Bioconductor Community
0 • written 18.4 years ago by
Jenny Drnevich
★ 2.2k
0
votes
2
replies
1.3k
views
trouble with installing "affyio"
affyio
rstudio docker
R 3.5.0
6.5 years ago
shidaxia
• 0
0
votes
1
reply
1.5k
views
Conda Env & biocLite("affyio") : < undefined symbol: gzclose >
Conda
affyio
error
6.6 years ago
benjamin.saintpierre
• 0
0
votes
1
reply
1.8k
views
simpleaffy segmentation fault
Survival
probe
genefilter
affy
affyio
Survival
probe
genefilter
affy
affyio
updated 10.0 years ago by
vlagani
• 0 • written 18.3 years ago by
Sucheta Tripathy
▴ 170
0
votes
9
replies
3.6k
views
R 2.15.1 ReadAffy error
affyio
affyio
updated 12.9 years ago by
Ben Bolstad
★ 1.2k • written 12.9 years ago by
Henrik Bengtsson
★ 2.4k
0
votes
0
replies
1.4k
views
problem in ReadAffy function (affy and affyio libraries)
affyio
affyio
15.0 years ago
Groot, Philip de
▴ 630
0
votes
1
reply
1.2k
views
justGCRMA problem :(
GO
Cancer
gcrma
matchprobes
PROcess
affyio
GO
Cancer
gcrma
matchprobes
PROcess
affyio
updated 16.1 years ago by
Jacek Nowak
▴ 20 • written 16.2 years ago by
Martin Morgan
25k
0
votes
0
replies
1.3k
views
justGCRMA problem :(
GO
gcrma
matchprobes
PROcess
affyio
GO
gcrma
matchprobes
PROcess
affyio
16.2 years ago
Jacek Nowak
▴ 20
0
votes
9
replies
2.6k
views
affy package RMA results difference from R2.5 to R2.8
affy
affyio
affy
affyio
updated 16.4 years ago by
balag Ganesan
▴ 140 • written 16.4 years ago by
He, Yiwen NIH/CIT
▴ 360
0
votes
2
replies
1.7k
views
ReadAffy crashes on mac
Preprocessing
affy
convert
affxparser
affyio
BUS
Preprocessing
affy
convert
affxparser
updated 16.8 years ago by
Ben Bolstad
★ 1.2k • written 16.7 years ago by
Nathan S. Watson-Haigh
▴ 40
0
votes
1
reply
1.4k
views
library(affyQCReport)-NA(arg1); arrayQualityMetrics-no end
Cancer
cdf
affy
simpleaffy
affyQCReport
affyio
arrayQualityMetrics
Cancer
cdf
affy
updated 16.8 years ago by
rgentleman
★ 5.5k • written 16.8 years ago by
Yisong Zhen
▴ 200
0
votes
4
replies
1.6k
views
Quality control;Missing value;installation
Cancer
cdf
affy
affyQCReport
affyio
arrayQualityMetrics
Cancer
cdf
affy
affyQCReport
updated 16.8 years ago by
rgentleman
★ 5.5k • written 16.8 years ago by
Yisong Zhen
▴ 200
0
votes
4
replies
3.4k
views
Problems installing bioconductor on ubuntu
affyio
affyio
updated 16.8 years ago by
Wolfgang Huber
★ 13k • written 16.8 years ago by
Rebecca Griffiths
▴ 20
0
votes
0
replies
1.3k
views
Problem with oneChannelGUI
GUI
Biobase
affy
affyio
oneChannelGUI
preprocessCore
GUI
Biobase
affy
affyio
16.9 years ago
Luc Vallieres
▴ 20
0
votes
2
replies
1.4k
views
affycoretools vennSelect problem
GO
Survival
annotate
genefilter
affy
graph
gcrma
annaffy
RBGL
GOstats
biomaRt
affyio
updated 16.9 years ago by
James W. MacDonald
68k • written 16.9 years ago by
PeadarÓGaora
▴ 30
0
votes
1
reply
968
views
affyio version update problem
affy
affyio
affy
affyio
updated 16.9 years ago by
James W. MacDonald
68k • written 16.9 years ago by
Kim Evans
▴ 10
0
votes
2
replies
2.0k
views
cannot allocate vector of size 762 Mo ! One more time !
affy
affyio
trigger
affy
affyio
trigger
updated 17.0 years ago by
cstrato
★ 3.9k • written 17.0 years ago by
Germain Paimparay
▴ 10
0
votes
3
replies
1.8k
views
Tiling arrays and their probes
cdf
affyio
cdf
affyio
updated 17.0 years ago by
Wolfgang Huber
★ 13k • written 17.1 years ago by
Steve Lianoglou
★ 13k
0
votes
0
replies
1.0k
views
affyio install deps
affyio
affyio
17.1 years ago
Caroline Johnston
▴ 20
0
votes
1
reply
1.2k
views
normalize.quantil, different results, affy_1.14.1 and affy_1.16.0
affy
affyio
affy
affyio
updated 17.2 years ago by
Ben Bolstad
★ 1.2k • written 17.2 years ago by
Markus Schmidberger
▴ 380
0
votes
4
replies
1.9k
views
Help with Affy TilingArray makePDpackage
affyio
oligo
affyio
oligo
updated 17.3 years ago by
Ben Bolstad
★ 1.2k • written 17.3 years ago by
Owen Thomas
▴ 40
0
votes
0
replies
1.4k
views
Inf values using SAM (package=siggenes)
Annotation
Survival
Cancer
genefilter
affy
limma
maDB
affyio
Annotation
Survival
Cancer
17.4 years ago
Holger Schwender
▴ 900
0
votes
1
reply
1.3k
views
Low-level analysis of custom microarrays
Microarray
Normalization
Cancer
probe
affy
limma
affyio
Microarray
Normalization
Cancer
updated 17.4 years ago by
Wolfgang Huber
★ 13k • written 17.4 years ago by
Martin Morgan
25k
0
votes
0
replies
1.1k
views
Low-level analysis of custom microarrays
Microarray
probe
affy
affyio
Microarray
probe
affy
affyio
17.4 years ago
Teresa Colombo
▴ 10
0
votes
0
replies
1.3k
views
Inf values using SAM (package=siggenes)
Survival
Cancer
affy
limma
maDB
affyio
Survival
Cancer
affy
limma
maDB
affyio
17.4 years ago
Julian Lee
▴ 140
0
votes
0
replies
1.1k
views
Oligo package and tiling arrays - PM and MM
cdf
affyio
oligo
BufferedMatrix
cdf
affyio
oligo
BufferedMatrix
17.5 years ago
Naira Naouar
▴ 140
0
votes
0
replies
1.3k
views
MTP error
GO
Survival
multtest
affy
affydata
annaffy
affyPLM
affyio
GO
Survival
multtest
affy
17.5 years ago
Boel Brynedal
▴ 200
0
votes
1
reply
1.6k
views
Problem reading data with beadarray package
geneplotter
affy
affyio
beadarray
quantsmooth
beadarraySNP
geneplotter
affy
affyio
updated 17.6 years ago by
Matt Ritchie
▴ 460 • written 17.6 years ago by
Elizabeth McClellan
▴ 10
0
votes
1
reply
1.1k
views
predict vsn with reference
Microarray
affy
vsn
limma
affyio
Microarray
affy
vsn
limma
affyio
updated 17.6 years ago by
Wolfgang Huber
★ 13k • written 17.6 years ago by
chrisk
▴ 10
0
votes
2
replies
1.4k
views
vsm2
Survival
geneplotter
affy
vsn
limma
affyio
Survival
geneplotter
affy
vsn
limma
affyio
updated 17.6 years ago by
Wolfgang Huber
★ 13k • written 17.6 years ago by
Richard Harrison
▴ 70
0
votes
1
reply
1.4k
views
beadarray: combining several beadsummary data objects
Biobase
geneplotter
affy
affyio
beadarray
Biobase
geneplotter
affy
affyio
beadarray
updated 17.6 years ago by
Matt Ritchie
▴ 460 • written 17.6 years ago by
Asta Laiho
▴ 70
0
votes
0
replies
1.3k
views
code for technical replicates in Limma with affy
Survival
cdf
annotate
affy
limma
gcrma
matchprobes
affyio
Survival
cdf
annotate
affy
17.6 years ago
Richard Friedman
★ 2.0k
0
votes
0
replies
979
views
problem running dev version of GCRMA
hgu133plus2
cdf
Biobase
affy
affyio
hgu133plus2
cdf
Biobase
affy
affyio
17.6 years ago
Martin Morgan
25k
0
votes
0
replies
1.2k
views
problem with function to interrogate x:Map (exonmap)
Survival
genefilter
affy
plier
affyio
exonmap
Survival
genefilter
affy
plier
affyio
17.7 years ago
Wolfgang Raffelsberger
▴ 160
0
votes
3
replies
2.5k
views
ReadAffy Error
Annotation
ExperimentData
cdf
affy
affyio
Annotation
ExperimentData
cdf
affy
affyio
updated 17.7 years ago by
Sylvia.Merk@ukmuenster.de
▴ 60 • written 17.7 years ago by
Markus Schmidberger
▴ 380
0
votes
1
reply
1.3k
views
Exonmap mapping problems
Survival
genefilter
affy
plier
affyio
exonmap
Survival
genefilter
affy
plier
affyio
updated 17.7 years ago by
Michal Okoniewski
▴ 120 • written 17.7 years ago by
Tore Eriksson
▴ 10
0
votes
1
reply
1.2k
views
error in maanova matest() with affymetrix
cdf
affy
maanova
affyio
cdf
affy
maanova
affyio
updated 17.7 years ago by
James W. MacDonald
68k • written 17.7 years ago by
Georg Otto
▴ 510
0
votes
3
replies
1.7k
views
pd.mapping 10Karray
BiocViews
cdf
affyio
biocViews
oligo
pdInfoBuilder
BufferedMatrix
BiocViews
BiocViews
cdf
updated 17.7 years ago by
Seth Falcon
★ 7.4k • written 17.8 years ago by
Marianne Tuefferd
▴ 10
0
votes
1
reply
1.4k
views
globaltest - multinomial model
Survival
affy
vsn
limma
globaltest
affyio
Survival
affy
vsn
limma
globaltest
affyio
updated 17.7 years ago by
Goeman, J.J. MSTAT
▴ 150 • written 17.7 years ago by
Hans-Ulrich Klein
▴ 330
0
votes
0
replies
1.2k
views
Pulling significant gene ids from beadarray data
Biobase
annotate
affy
affyio
beadarray
quantsmooth
beadarraySNP
lumi
Biobase
annotate
17.8 years ago
Johnstone, Alice
▴ 410
0
votes
7
replies
1.9k
views
Problems with affycomp - quantile.default
cdf
affy
affycomp
affyio
cdf
affy
affycomp
affyio
updated 17.8 years ago by
James W. MacDonald
68k • written 17.8 years ago by
Markus Schmidberger
▴ 380
0
votes
3
replies
1.6k
views
GDS2eSet problems
Biobase
affy
convert
affyio
GEOquery
Biobase
affy
convert
affyio
GEOquery
17.8 years ago
Mcmahon, Wyatt
▴ 50
0
votes
1
reply
3.8k
views
RE : create an new AnnotatedDataFrame
Annotation
Survival
Yeast
Biobase
genefilter
tkWidgets
marray
convert
arrayMagic
affyio
updated 17.8 years ago by
Martin Morgan
25k • written 17.8 years ago by
Yad Ghavi-Helm
▴ 30
0
votes
1
reply
1.4k
views
beadarray - combing
geneplotter
affy
affyio
beadarray
quantsmooth
beadarraySNP
geneplotter
affy
affyio
updated 17.8 years ago by
Mark Dunning
▴ 320 • written 17.8 years ago by
Krys Kelly
▴ 270
0
votes
1
reply
1.6k
views
ControlID Qcinfo slot in Illumina beadarray summary data?
geneplotter
affy
affyio
beadarray
quantsmooth
beadarraySNP
geneplotter
affy
affyio
updated 17.8 years ago by
Mark Dunning
▴ 320 • written 17.8 years ago by
Johnstone, Alice
▴ 410
0
votes
1
reply
2.0k
views
create an new AnnotatedDataFrame
Survival
Yeast
Biobase
genefilter
tkWidgets
marray
convert
arrayMagic
affyio
Survival
updated 17.8 years ago by
Martin Morgan
25k • written 17.8 years ago by
Yad Ghavi-Helm
▴ 30
0
votes
1
reply
1.4k
views
An error of affylmGUI
cdf
affy
affylmGUI
affyio
cdf
affy
affylmGUI
affyio
updated 17.8 years ago by
Keith Satterley
▴ 450 • written 17.8 years ago by
lidaof
▴ 450
0
votes
1
reply
1.5k
views
Problems with expresso
Preprocessing
cdf
affy
affyio
Preprocessing
cdf
affy
affyio
updated 17.8 years ago by
Martin Morgan
25k • written 17.8 years ago by
Markus Schmidberger
▴ 380
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