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Showing :
oligoClasses
•
reset
2
votes
8
replies
858
views
pdInfoBuilder created problematic package for Affymetrix chip tiling array
oligoClasses
oligo
pdInfoBuilder
2.2 years ago
efoss
▴ 10
0
votes
2
replies
1.2k
views
Error in library(oligo) : package or namespace load failed for ‘oligoClasses’
R
oligoClasses
Oligoclass
Bioconductor
Oligo
updated 2.6 years ago by
Martin Morgan
25k • written 2.6 years ago by
tanya
• 0
2
votes
6
replies
3.4k
views
Can't install package oligoClasses
R
oligoClasses
ff
updated 3.1 years ago by
Kevin Blighe
3.8k • written 3.1 years ago by
salamandra
▴ 20
2
votes
2
replies
1.7k
views
IRanges which are not S4 generic: endoapply mendoapply error in loading oligoclasses
iranges
oligoclasses
BiocGenerics
5.3 years ago
GENOMIC_region
• 0
0
votes
7
replies
1.5k
views
oligo and GenericPDInfo
affy
oligoclasses
oligo package
pdinfobuilder
annotationdbi
updated 6.2 years ago by
James W. MacDonald
63k • written 6.2 years ago by
Aedin Culhane
▴ 510
2
votes
1
reply
1.1k
views
Output of ArrayExpress() function
oligo
oligoclasses
arrayexpress
updated 6.7 years ago by
James W. MacDonald
63k • written 6.7 years ago by
ste0891
• 0
2
votes
4
replies
1.2k
views
getProbeInfo and exprs return matrices and data.frames of different dimensions
oligo
oligoclasses
affy
updated 6.9 years ago by
James W. MacDonald
63k • written 6.9 years ago by
mark.aaron.fisher
• 0
0
votes
2
replies
2.2k
views
Cannot install Oligo package
oligo
oligoclasses
7.2 years ago
Anna Dvorkin
▴ 40
0
votes
2
replies
1.6k
views
pdInfoBuilder fails on Affy's GeneChip Human Transcriptome Array 2.0
BiocViews
Annotation
Organism
biocViews
oligo
oligoClasses
BiocViews
BiocViews
Annotation
updated 8.4 years ago by
Jason Hubbard
▴ 20 • written 9.7 years ago by
Guilherme Rocha
▴ 40
0
votes
0
replies
1.4k
views
Error using oligo package with Affymetrix Arabidopsis Gene ST1.0 array data: paCalls() returns error 'vector would be too long'
oligo
oligoClasses
oligo
oligoClasses
9.7 years ago
Peter Crisp
▴ 10
0
votes
1
reply
1.3k
views
limma2annaffy
GO
GUI
annaffy
oligo
oligoClasses
KEGGREST
GO
GUI
annaffy
oligo
oligoClasses
KEGGREST
updated 9.8 years ago by
James W. MacDonald
63k • written 9.8 years ago by
Guest User
★ 12k
0
votes
8
replies
1.9k
views
vsn preprocess with oligo package
vsn
oligo
oligoClasses
vsn
oligo
oligoClasses
updated 10.7 years ago by
James W. MacDonald
63k • written 10.7 years ago by
José LÓPEZ
▴ 110
0
votes
4
replies
2.6k
views
Problems with 'affxparser' package
oligoClasses
oligoClasses
10.7 years ago
Valor Becerra, Luis Miguel
▴ 30
3
votes
4
replies
1.5k
views
cause 'memory not mapped' when use oligo
oligo
oligoClasses
oligo
oligoClasses
updated 11.0 years ago by
Benilton Carvalho
▴ 50 • written 11.0 years ago by
Ou, Jianhong
★ 1.3k
0
votes
4
replies
2.7k
views
Error : package slot missing from signature for generic
Biobase
lumi
oligoClasses
Biobase
lumi
oligoClasses
11.2 years ago
Mark Cowley
▴ 910
0
votes
2
replies
1.3k
views
pdInfoBuilder fails on the new Arabidopsis Gene ST 1.0 & 1.1 arrays
Annotation
oligo
pdInfoBuilder
oligoClasses
Annotation
oligo
pdInfoBuilder
oligoClasses
updated 11.6 years ago by
Benilton Carvalho
★ 4.3k • written 11.6 years ago by
Groot, Philip de
▴ 630
0
votes
0
replies
1.1k
views
Question about using oligo and SNPchip for copy number analysis
SNP
Cancer
graph
oligo
SNPchip
oligoClasses
VanillaICE
crlmm
SNP
Cancer
graph
oligo
14.4 years ago
Min-Han Tan
▴ 40
0
votes
0
replies
760
views
Bioconductor Digest, Vol 68, Issue 7
oligo
pdInfoBuilder
oligoClasses
oligo
pdInfoBuilder
oligoClasses
15.0 years ago
Matt Settles
▴ 70
18 results • Page
1 of 1
Recent ...
Replies
Comment: Biostrings error at retrieving protein sequences
by
James W. MacDonald
63k
It depends on what kind of whitespace it is. If the whitespace is just a space, then it will work. But if it's a tab, it won't. ``` > gsub…
Comment: Biostrings error at retrieving protein sequences
by
nromerov
• 0
If i write it like ```r gsub(" .*", "", names(protein_sequences)) ``` it will delet all the extra information if it is on the AAString…
Comment: bug in block.plsda from mixOmics?
by
Lluís Revilla Sancho
▴ 720
Oh, sorry for the noise, I see that just after Bioconductor 3.16 the bug is fixed in both 3.17 and in devel. Thanks for checking.
Answer: Mixed up sample info with plotPCA
by
Michael Love
40k
I can already tell there is code you aren't showing. For example, your `pcaData` has a variable 'group' that isn't in the previous sample i…
Comment: Biostrings error at retrieving protein sequences
by
nromerov
• 0
Thaks a lot for your help
Votes
Answer: Mouse to Human Genes using bioconductor
Mouse to Human Genes using bioconductor
Answer: Biostrings error at retrieving protein sequences
Answer: Biostrings error at retrieving protein sequences
Answer: How do I merge a list of GRanges?
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