Showing : db0 • reset
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Spam: Ground Handling Companies in Maldives
alabaster.schemas db0
4 months ago vvipflight01 0
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Spam: GenOMICC DNA biobank
alabaster.schemas db0
5 months ago Jolka 0
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Join BOC Sciences at Drug Discovery Chemistry
alabaster.schemas db0
8 months ago bocsci11 • 0
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News: Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available
db0 release Annotation
14 months ago kayla.interdonato ▴ 160
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News: Bioconductor 3.17 db0s, OrgDbs, and TxDbs now available
release db0 Annotation
20 months ago kayla.interdonato ▴ 160
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News: Bioconductor 3.16 db0s, OrgDbs and TxDbs now available
release db0 annotation
2.2 years ago kayla.interdonato ▴ 160
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1.1k
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News: Bioconductor 3.15 db0s, OrgDbs and TxDbs now available
annotation release db0
2.6 years ago kayla.interdonato ▴ 160
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986
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News: Bioconductor 3.13 db0s, OrgDbs and TxDbs now available
annotation release db0
3.6 years ago kayla.interdonato ▴ 160
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1.1k
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News: Bioconductor 3.12 db0s, OrgDbs and TxDbs now available
annotation db0 news release News
4.1 years ago kayla.interdonato ▴ 160
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787
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News: Bioconductor 3.11 db0s are available
annotation db0 news release News
4.7 years ago kayla.interdonato ▴ 160
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779
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News: Bioconductor 3.10 db0s are available
news release annotation db0 deadline News
5.2 years ago kayla.interdonato ▴ 160
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1.0k
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ka
Annotation db0 Annotation db0
11.2 years ago Guest User ★ 13k
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2.2k
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problem with makeOrgPackageFromNCBI (for Chinese hamster)
Annotation GO db0 PROcess Annotation GO db0 PROcess
updated 11.3 years ago by ★ 7.2k • written 11.3 years ago by ★ 4.1k
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1.1k
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Add new affy organism platform
Microarray Annotation Organism cdf db0 probe annotate affy Microarray Annotation cdf
updated 11.6 years ago by ★ 7.2k • written 11.6 years ago by ▴ 50
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450K annotation: discrepancy between GEO GPL and Bioconductor annotation
Annotation db0 probe annotate PROcess GenomicFeatures GenomicRanges Annotation db0 probe
12.1 years ago Marc Carlson ★ 7.2k
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1.2k
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building an annotation library from scratch
miRNA Annotation Organism db0 AnnotationDbi microRNA miRNA Annotation Organism db0
updated 15.1 years ago by ★ 7.2k • written 15.1 years ago by ▴ 610
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building an annotation library from scratch
miRNA Annotation db0 AnnotationDbi miRNA Annotation db0 AnnotationDbi
15.1 years ago Guido Hooiveld ★ 4.1k
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2
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1.9k
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GO terms for E. coli micro arrays (ecoliK12.db generation)
Annotation GO Yeast db0 probe topGO AnnotationDbi Annotation GO Yeast db0 probe topGO
updated 15.5 years ago by ★ 7.2k • written 15.5 years ago by ▴ 20
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1.0k
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hyperGTest, different Results using different annotation packages
Microarray Annotation GO ChipName db0 GOstats Category Microarray Annotation GO ChipName
15.7 years ago Wiebke Iffert ▴ 20
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1
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1.2k
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memory corruption in make.cdf.package() reading binary CDF with BioC 2.3
cdf db0 cdf db0
updated 16.1 years ago by ★ 13k • written 16.1 years ago by ▴ 10
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1
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1.9k
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problem with AnnotationDbi
ChipName db0 affy Category AnnotationDbi ChipName db0 affy Category AnnotationDbi
updated 16.1 years ago by 16k • written 16.1 years ago by ▴ 830
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2
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1.5k
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GO over representation analysis
Annotation Pathways GO Organism db0 AnnBuilder PROcess maanova AnnotationDbi Annotation
updated 16.3 years ago by ▴ 220 • written 16.3 years ago by ★ 7.2k
22 results • Page 1 of 1
Recent ...
Replies
Comment: lfcShrink and alpha value by cropero • 0
Thank you for your fast answer, I have everything clear now
Answer: DESeq2 - Comparing Comparisons by James W. MacDonald 67k
Assuming that WC in your equation #2 is different in KD1 subunit1_vs_WC and SCR subunit1_vs_WC, this is just an interaction, and the easies…
Comment: Differential Expression Genes as Independent Variables by James W. MacDonald 67k
An alternative to that is to use the `glmnet` package to fit a regularized regression using all proteins at once.
Comment: Differential Expression Genes as Independent Variables by abadgerw • 0
Thanks. The proposal was not to include all proteins as covariates in one model but to iterate with one protein serving as the independent …
Answer: How to annotate a limma Elist raw class object with an annotation file by James W. MacDonald 67k
Your first step when trying to use a function is to read the help page (`?mapIds`), which will bring this up: ``` Usage: colu…
Votes
A: deseq2 filter the low counts
A: deseq2 filter the low counts
scuttle::perFeatureQCMetrics runs very slow for big scRNA-seq data
Comment: pathview - multiple states
Answer: Crossover design with limma
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