Showing : db0 • reset
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Spam: Ground Handling Companies in Maldives
alabaster.schemas db0
4 months ago vvipflight01 0
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Spam: GenOMICC DNA biobank
alabaster.schemas db0
4 months ago Jolka 0
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330
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Join BOC Sciences at Drug Discovery Chemistry
alabaster.schemas db0
8 months ago bocsci11 • 0
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News: Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available
db0 release Annotation
13 months ago kayla.interdonato ▴ 160
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News: Bioconductor 3.17 db0s, OrgDbs, and TxDbs now available
release db0 Annotation
19 months ago kayla.interdonato ▴ 160
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News: Bioconductor 3.16 db0s, OrgDbs and TxDbs now available
release db0 annotation
2.1 years ago kayla.interdonato ▴ 160
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1
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1.1k
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News: Bioconductor 3.15 db0s, OrgDbs and TxDbs now available
annotation release db0
2.6 years ago kayla.interdonato ▴ 160
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974
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News: Bioconductor 3.13 db0s, OrgDbs and TxDbs now available
annotation release db0
3.5 years ago kayla.interdonato ▴ 160
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1
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1.1k
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News: Bioconductor 3.12 db0s, OrgDbs and TxDbs now available
annotation db0 news release News
4.1 years ago kayla.interdonato ▴ 160
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777
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News: Bioconductor 3.11 db0s are available
annotation db0 news release News
4.6 years ago kayla.interdonato ▴ 160
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770
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News: Bioconductor 3.10 db0s are available
news release annotation db0 deadline News
5.1 years ago kayla.interdonato ▴ 160
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1.0k
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ka
Annotation db0 Annotation db0
11.1 years ago Guest User ★ 13k
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problem with makeOrgPackageFromNCBI (for Chinese hamster)
Annotation GO db0 PROcess Annotation GO db0 PROcess
updated 11.2 years ago by ★ 7.2k • written 11.2 years ago by ★ 4.1k
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1.1k
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Add new affy organism platform
Microarray Annotation Organism cdf db0 probe annotate affy Microarray Annotation cdf
updated 11.5 years ago by ★ 7.2k • written 11.5 years ago by ▴ 50
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450K annotation: discrepancy between GEO GPL and Bioconductor annotation
Annotation db0 probe annotate PROcess GenomicFeatures GenomicRanges Annotation db0 probe
12.1 years ago Marc Carlson ★ 7.2k
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1
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1.2k
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building an annotation library from scratch
miRNA Annotation Organism db0 AnnotationDbi microRNA miRNA Annotation Organism db0
updated 15.0 years ago by ★ 7.2k • written 15.0 years ago by ▴ 610
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1.2k
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building an annotation library from scratch
miRNA Annotation db0 AnnotationDbi miRNA Annotation db0 AnnotationDbi
15.0 years ago Guido Hooiveld ★ 4.1k
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2
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1.9k
views
GO terms for E. coli micro arrays (ecoliK12.db generation)
Annotation GO Yeast db0 probe topGO AnnotationDbi Annotation GO Yeast db0 probe topGO
updated 15.4 years ago by ★ 7.2k • written 15.4 years ago by ▴ 20
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1.0k
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hyperGTest, different Results using different annotation packages
Microarray Annotation GO ChipName db0 GOstats Category Microarray Annotation GO ChipName
15.6 years ago Wiebke Iffert ▴ 20
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1
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1.2k
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memory corruption in make.cdf.package() reading binary CDF with BioC 2.3
cdf db0 cdf db0
updated 16.0 years ago by ★ 13k • written 16.0 years ago by ▴ 10
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1
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1.9k
views
problem with AnnotationDbi
ChipName db0 affy Category AnnotationDbi ChipName db0 affy Category AnnotationDbi
updated 16.0 years ago by 16k • written 16.0 years ago by ▴ 830
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2
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1.5k
views
GO over representation analysis
Annotation Pathways GO Organism db0 AnnBuilder PROcess maanova AnnotationDbi Annotation
updated 16.2 years ago by ▴ 220 • written 16.2 years ago by ★ 7.2k
22 results • Page 1 of 1
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Replies
Comment: Differential Expression Analysis with unbalanced batches without replication bet by Thili • 0
Thank you for your reply. I currently have batch-corrected data processed with scvi-tools (specifically, totalvi) and have followed the sam…
Comment: Problem at champ.load by andrew.gibbons • 0
I'd love to know if anyone has a workaround too. I've tried rolling back ChAMP and R to the previous versions that others have said work wi…
Comment: GOstats kegg analysis in wheat - help - none of the objects in the first column by GV Yoshikawa • 0
Thank you for the reply. I tried swapping columns before asking, it made no difference. head(keggframeData) path_id kegg…
Answer: Differential Expression Analysis with unbalanced batches without replication bet by Gordon Smyth 51k
> Is there an alternative model or approach in tools like edgeR, limma-voom, or DESeq2 or any other that can handle confounded batch effect…
Comment: BiomaRt Possible Ensembl SSL connectivity problems detected. by Adam • 0
I just found this workaround: httr::set_config(config(ssl_verifypeer = FALSE, ssl_verifyhost = FALSE)) at [this Stack Overflow link][…
Votes
A: Up/Down Regulated GeneList from edgeR and R
A: Up/Down Regulated GeneList from edgeR and R
A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis
Answer: Combining RNAseq and microarray data using edgeR/limma-voom
Answer: How do I merge a list of GRanges?
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