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deconvolution
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420
views
Cell type deconvolution of RNAseq data- Create signature matrix of cells
deconvolution
rnaseqGene
RNAseq
7 months ago
JG13
• 0
2
votes
2
replies
1.6k
views
How to deal with Expression set assembly problem?
deconvolution
r
scRNAseq
bioinformatics
3.0 years ago
Hasan Alanya
• 0
0
votes
0
replies
1.2k
views
Best deconvolution method
Deconvolution
3.3 years ago
Barista
• 0
0
votes
1
reply
835
views
PSEA deconvolution; some of the coefficient is NA?
PSEA
Deconvolution
4.7 years ago
kavator
▴ 30
0
votes
0
replies
1.2k
views
Deconvolution methods from WGBS data (methylation)
methylCC
deconvolution
methylation
dmrseq
serum
4.9 years ago
marcin.bazyliszek
• 0
0
votes
2
replies
950
views
csSAMfit with covariates
limma
microarray
deconvolution
cell type
updated 5.0 years ago by
Gordon Smyth
52k • written 5.0 years ago by
antgomo
• 0
0
votes
4
replies
1.5k
views
varianceStabilizingTransformation for clustering, deconvolution
deseq2
deconvolution
normalization
limma
updated 6.1 years ago by
Michael Love
43k • written 6.1 years ago by
bruce.moran
▴ 30
0
votes
0
replies
1.1k
views
Deconvolute bulk RNA-Seq from human epithelial tissue scrapings with immune/blood cell contamination
deconvolution
methods
7.1 years ago
casey.rimland
▴ 170
1
vote
1
reply
1.2k
views
Expression deconvolution using PSEA: applicable to RNA-seq?
deconvolution
rnaseq
psea
7.1 years ago
WouterDeCoster
▴ 130
1
vote
1
reply
3.0k
views
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
deconvolution
rna-seq
updated 9.4 years ago by
Steve Lianoglou
★ 13k • written 9.4 years ago by
Pauly Lin
▴ 160
0
votes
0
replies
1.8k
views
CellMix - Custom matrix with Abbas signature
deconvolution
cellmix
9.7 years ago
carleshf
▴ 10
11 results • Page
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Comment: normalizatino of dna methylation EPIC data
by
user_bioinfo
• 0
yes actually that's why I did, and its all good! thank you for your response
Comment: batch effect removal for agilent microarray data
by
gaye.yilmaz
• 0
Hello again, Can using inSilicoMerging handle this situation?
Answer: normalizatino of dna methylation EPIC data
by
James W. MacDonald
68k
Your code doesn't show the error? Anyway, the default for `colMeans2` is useNames = TRUE, and the call to `colMeans2` in `preprocessNoob…
Answer: WGCNA
by
James W. MacDonald
68k
This support site is meant to help people with technical questions about using Bioconductor packages, rather than as a place to get analysi…
Answer: EuroBioC2023 abstract submission is open!
by
cirwin009
• 0
Submit here https://openreview.net/group?id=bioconductor.org/EuroBioC/2023/ [Block Blast][1] This article offers a thorough and in-depth…
Votes
Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
Answer: normalizatino of dna methylation EPIC data
Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
Suggesting changing the "reply-to" field to the mailing list address.
Answer: UniProt.ws query for single UniRef90 ID takes several minutes
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