Bioconductor Foldchange

Showing : foldchange • reset

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1.3k

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StatisticalMethod FoldChange edgeR RNASeq

2.1 years ago Sabiha ▴ 20

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5.2k

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FoldChange DiffBind lfcShrink

updated 2.5 years ago by Rory Stark ★ 5.2k • written 2.5 years ago by bhandary.8590 ▴ 20

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1.8k

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FoldChange DiffBind lfcShrink Cut&TagData

2.6 years ago bhandary.8590 ▴ 20

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2.4k

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DESeq2 TPM Foldchange

updated 3.8 years ago by Michael Love 43k • written 3.8 years ago by dadca596 • 0

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1.4k

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edgeR RNA-Seq log2 foldchange q_value

updated 4.0 years ago by Gordon Smyth 53k • written 4.0 years ago by johndavidgriner74 • 0

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1.8k

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sign FoldChange DESeq2 reference

updated 4.1 years ago by Michael Love 43k • written 4.1 years ago by yampolsk • 0

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7.9k

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DifferentialExpression DEA FC FoldChange edgeR

4.4 years ago zhxiaokang ▴ 20

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3.5k

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EdgeR RNAseq Foldchange

updated 4.5 years ago by swbarnes2 ★ 1.4k • written 4.6 years ago by najib • 0

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4.9k

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foldchange topGO DifferentialExpression enrichment

updated 5.2 years ago by Gordon Smyth 53k • written 5.2 years ago by lessismore ▴ 20

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2.2k

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limma microarray foldchange DEG GEO

updated 5.9 years ago by Gordon Smyth 53k • written 6.0 years ago by Pietro ▴ 40

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1.9k

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DEXSeq DTU salmon rnaseqDTU foldchange

updated 6.7 years ago by Michael Love 43k • written 7.0 years ago by fiona.dick91 ▴ 60

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1.9k

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limma RNAseq foldchange

6.9 years ago susana.amaral.teixeira ▴ 20

12 results • Page 1 of 1

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Comment: Pairwise comparison of multiple groups with different base by ja569116 • 0

Hi @mikelove I have a similar situation, and I feel that I have interpreted the results in the wrong way. In my case I would like to identi…

Comment: Are individual-mouse-based statistics possible in CellChat? by TikTsossakaas33ocissalpc • 0

Questions about comparing groups and statistical significance highlight how data driven thinking matters across fields. In online mobile ga…

Comment: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink by ja569116 • 0

Hi @atpoint Thanks for the information. Could you please expand on when to use adjusted p-values vs nominal p-values. My understanding was …

Answer: limpa analysis advice by Gordon Smyth 53k

It is actually very hard to estimate the DPC from observed data, because the curve is function of unobserved intensities rather than a func…

Answer: When to use edgeR or limma by Gordon Smyth 53k

The short answer is that we generally prefer edgeR for applications with lots of small counts and limma for complex designs with random eff…

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Answer: When to use edgeR or limma

A: deseq2 - paired samples in 2 sequencing types with very different library sizes

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Popular Question to Lluís Revilla Sancho ▴ 760