Bioconductor Foldchange

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StatisticalMethod FoldChange edgeR RNASeq

14 months ago Sabiha ▴ 20

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4.9k

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FoldChange DiffBind lfcShrink

updated 19 months ago by Rory Stark ★ 5.2k • written 20 months ago by bhandary.8590 ▴ 20

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1.3k

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FoldChange DiffBind lfcShrink Cut&TagData

21 months ago • updated 20 months ago bhandary.8590 ▴ 20

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2.1k

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DESeq2 TPM Foldchange

updated 2.9 years ago by Michael Love 43k • written 2.9 years ago by dadca596 • 0

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1.2k

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edgeR RNA-Seq log2 foldchange q_value

updated 3.2 years ago by Gordon Smyth 52k • written 3.2 years ago by johndavidgriner74 • 0

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1.5k

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sign FoldChange DESeq2 reference

updated 3.2 years ago by Michael Love 43k • written 3.2 years ago by yampolsk • 0

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6.7k

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DifferentialExpression DEA FC FoldChange edgeR

3.5 years ago zhxiaokang ▴ 20

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3.0k

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EdgeR RNAseq Foldchange

updated 3.7 years ago by swbarnes2 ★ 1.4k • written 3.7 years ago by najib • 0

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3.7k

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foldchange topGO DifferentialExpression enrichment

updated 4.3 years ago by Gordon Smyth 52k • written 4.3 years ago by lessismore ▴ 20

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1.8k

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limma microarray foldchange DEG GEO

updated 5.1 years ago by Gordon Smyth 52k • written 5.1 years ago by Pietro ▴ 40

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1.6k

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DEXSeq DTU salmon rnaseqDTU foldchange

updated 5.9 years ago by Michael Love 43k • written 6.2 years ago by fiona.dick91 ▴ 60

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1.7k

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limma RNAseq foldchange

6.0 years ago susana.amaral.teixeira ▴ 20

12 results • Page 1 of 1

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Comment: error in ChAMP loading file by shocked.tick.zyet • 0

Great troubleshooting steps for ChAMP import issues! "ChAMP methylation data import errors" on [Google Search][1] for similar cases. Header…

Comment: orgDB by jenniferping36 • 0

Thanks for the suggestion! I'll check out the resources.

Comment: sesameDataCache is not work properly on my system by Samreen • 0

Any luck with this? I have tried all of the above and it still doesn't work. This is my session info and I'm on a cluster computing environ…

Answer: Using tximport for kallisto aligned TOIL data by James W. MacDonald 68k

If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …

Answer: Reading gene expression data in GPR format and converting it to xlsx format by James W. MacDonald 68k

Setting aside the inadvisability of putting these data into Excel (and I should point out that these data are not single-cell, but instead …

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Answer: Differential expression of proteins using somascan data

Answer: Surprising behavior for DEXseq dispersion estimate plot?

Answer: Handle zero effective gene length when tximport RSEM results

Handle zero effective gene length when tximport RSEM results

How to remove genes with 0 counts in tximport?

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