Bioconductor Genes

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DESeq2 genes Differential expressed

11 months ago Syed Zaheer ▴ 10

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875

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GeneSetEnrichment genes genetogo

updated 22 months ago by Basti ▴ 780 • written 22 months ago by Noy • 0

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607

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R microRNA genes binding Site

4.8 years ago pengu447 • 0

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1.3k

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edger differential expression genes fold change

updated 4.9 years ago by Aaron Lun ★ 28k • written 4.9 years ago by ilovesuperheroes1993 • 0

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698

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deseq2 genes expression

updated 5.1 years ago by Michael Love 41k • written 5.1 years ago by UserAnonyme • 0

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topGO significant enrichment genes IDs

5.3 years ago David ROUX ▴ 20

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913

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deseq2 variance genes

updated 6.4 years ago by Michael Love 41k • written 6.4 years ago by hs.lansdell ▴ 20

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cnv genes genomic ranges splitByOverlap

updated 7.1 years ago by Martin Morgan 25k • written 7.1 years ago by julrodr80 ▴ 30

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701

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deseq2 genes

updated 7.7 years ago by Michael Love 41k • written 7.7 years ago by silviajserrano • 0

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2.6k

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deseq2 wald lrt genes significance

updated 7.9 years ago by Michael Love 41k • written 7.9 years ago by aziza ▴ 20

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2.4k

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heatmap rownames genes

8.6 years ago johnlee.johnson • 0

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1.2k

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datasets genes gene expression

updated 8.7 years ago by Steve Lianoglou ★ 13k • written 8.7 years ago by vavecilla • 0

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Answer: DESeq2 v1.35.0 by Michael Love 41k

That is not a release (odd 'y' digit). See Bioconductor help pages: https://contributions.bioconductor.org/description.html#description-ver…

Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i by James W. MacDonald 65k

Please don't piggyback on posts from 2.3 years ago. If you have a question, post as a new question.

Answer: DESeq2 v1.35.0 by James W. MacDonald 65k

Odd release versions indicate a devel version, which upon release is incremented to the next even version, so you won't be able to find tha…

Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i by fatinataly • 0

I tried also with oligo does not work, any other suggestion?

Comment: More regions in union when increasing DBA$config$mergeOverlap by Ian D. ▴ 70

Hello. Thanks for the reply. Sorry about this. My testing is telling me that 1 is the default (a gap), not -1 (1bp overlap). Negative …

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Bioconductor 3.19 is Released!

A: Error in DESeqDataSet : some values in assay are not integers

Bioconductor 3.19 is Released!

Answer: DEseq2 coefficient

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Popular Question to rohitsatyam102 ▴ 20