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Showing :
genes
•
reset
0
votes
2
replies
507
views
Deseq2 design
DESeq2
genes
Differential
expressed
12 months ago
Syed Zaheer
▴ 10
0
votes
1
reply
889
views
enrichment to common gene
GeneSetEnrichment
genes
genetogo
updated 23 months ago by
Basti
▴ 780 • written 23 months ago by
Noy
• 0
0
votes
1
reply
613
views
find genes near a microRNA binding site
R
microRNA
genes
binding Site
4.8 years ago
pengu447
• 0
2
votes
4
replies
1.3k
views
Majority upregulated genes in edgeR
edger
differential expression
genes
fold change
updated 4.9 years ago by
Aaron Lun
★ 28k • written 4.9 years ago by
ilovesuperheroes1993
• 0
1
vote
2
replies
712
views
Two factors design with DESEq2
deseq2
genes
expression
updated 5.1 years ago by
Michael Love
42k • written 5.1 years ago by
UserAnonyme
• 0
1
vote
1
reply
1.1k
views
How to retreive topGO significant IDs of genes after enrichment test ?
topGO
significant
enrichment
genes
IDs
5.3 years ago
David ROUX
▴ 20
0
votes
1
reply
923
views
Running DESeq2 on top variable genes?
deseq2
variance
genes
updated 6.5 years ago by
Michael Love
42k • written 6.5 years ago by
hs.lansdell
▴ 20
2
votes
2
replies
1.1k
views
list fo genes by cnv
cnv
genes
genomic ranges
splitByOverlap
updated 7.1 years ago by
Martin Morgan
25k • written 7.1 years ago by
julrodr80
▴ 30
0
votes
1
reply
704
views
No differentyally expresses genes
deseq2
genes
updated 7.8 years ago by
Michael Love
42k • written 7.8 years ago by
silviajserrano
• 0
0
votes
3
replies
2.6k
views
Wald vs LRT: different number of significant genes when testing the same coefficient
deseq2
wald
lrt
genes
significance
updated 7.9 years ago by
Michael Love
42k • written 7.9 years ago by
aziza
▴ 20
0
votes
1
reply
2.4k
views
Display subset of rownames in large heatmap?
heatmap
rownames
genes
8.7 years ago
johnlee.johnson
• 0
0
votes
2
replies
1.2k
views
Help needed to identify common genes among datasets
datasets
genes
gene expression
updated 8.7 years ago by
Steve Lianoglou
★ 13k • written 8.7 years ago by
vavecilla
• 0
12 results • Page
1 of 1
Recent ...
Replies
Comment: error running enricher from clusterprofiler
by
Yael
• 0
It worked!!! Thanks alot, i think something in the gene_list wasnt right... Thanks agian
Comment: Create protein sequences including variants from a VCF file
by
Yun
• 0
This cannot work for a SNV file, since `injectSNPs` need a `SNPlocs` object
Comment: Can log2cpm be used for proteomics data normalization?
by
Daniel
• 0
Thank you for the quick reply and I apologize for it being on the wrong thread but the "post tag" function wasn't working properly.
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Patadù
▴ 10
I have arranged the code again following the other post and also the script you suggested. Now, I managed to install `org.Vdahliae.eg.db`. …
Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
by
Patadù
▴ 10
Thanks again Guido, I will try to run the script you have suggested and see if I can install the package. Yes, I have seen this message a…
Votes
Answer: Trim/Filter out-of-bounds GRanges
Comment: How to correctly adjust for gender in edgeR
Create protein sequences including variants from a VCF file
A: DEXSeq design formula
Answer: SGSeq: moving toward diffex from SGSeq analysis
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