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gviz-package
•
reset
0
votes
0
replies
1.2k
views
Combine UCSC mm9 conservation and hg19 SNP data
gviz-package
8.1 years ago • updated 3.9 years ago
underscore
• 0
4
votes
4
replies
3.1k
views
Gviz: ylim of the AlignmentsTrack
gviz
gviz-package
updated 4.0 years ago by
Pariksheet Nanda
▴ 120 • written 7.2 years ago by
wsciekly.maciek
▴ 10
2
votes
9
replies
2.7k
views
Gviz: decreasing tick resolution
gviz
gviz-package
updated 7.0 years ago by
Robert Ivanek
▴ 750 • written 7.0 years ago by
willbradshaw
• 0
1
vote
2
replies
2.8k
views
Gviz: Setting Up Colour / Fill for AnnotationTrack (strand-dependent colour)
Gviz
gviz-package
GFF
annotationtrack
strand-dependent
updated 7.0 years ago by
Robert Ivanek
▴ 750 • written 7.0 years ago by
JezDD
• 0
0
votes
0
replies
2.7k
views
Gviz: plotting multiple data tracks with the same y-axis limit using Gviz
Gviz
gviz-package
7.3 years ago • updated 7.2 years ago
Mthabisi Moyo
▴ 40
1
vote
1
reply
1.9k
views
How to plot circular genomes with gviz?
gviz
gviz-package
7.3 years ago
Christopher.Rands
▴ 10
2
votes
6
replies
4.8k
views
Gviz change color of groups
gviz-package
gviz
updated 7.4 years ago by
florian.hahne@novartis.com
★ 1.6k • written 7.4 years ago by
gamma.jian
▴ 10
0
votes
1
reply
1.3k
views
Gviz: Histograms in layers instead of stacked ANSWERED!
R
Gviz
gviz-package
7.5 years ago • updated 7.4 years ago
stephen.williams
▴ 10
0
votes
1
reply
1.3k
views
Gviz: Multiple BiomartGeneRegionTrack one object for Composite plots
gviz
gviz-package
7.5 years ago
stephen.williams
▴ 10
1
vote
0
replies
1.3k
views
Arrange Gviz plotTracks() figure and basic R plot on a canvas
gviz
gviz-package
7.6 years ago
izzy.yichao.cai
▴ 10
2
votes
3
replies
1.3k
views
Gviz: Flip tracks so 5 prime end always on left hand side.
gviz
gviz-package
updated 7.6 years ago by
Robert Ivanek
▴ 750 • written 7.6 years ago by
stephen.williams
▴ 10
0
votes
1
reply
1.4k
views
Error GC content and conservation visualization with Gviz
gviz
gviz-package
updated 7.6 years ago by
Robert Ivanek
▴ 750 • written 7.6 years ago by
h
• 0
0
votes
2
replies
1.6k
views
Gviz: Draw horizontal line on DataTrack
gviz
gviz-package
datatrack
plottracks
7.8 years ago
stephen.williams
▴ 10
0
votes
2
replies
1.8k
views
GViz, different group colours
gviz
gviz-package
updated 7.9 years ago by
James W. MacDonald
68k • written 7.9 years ago by
p1990
• 0
0
votes
4
replies
2.4k
views
Gviz IdeogramTrack fails with Error: failed to load HTTP resource
gviz
gviz-package
rtracklayer
http
7.9 years ago
enricoferrero
▴ 680
3
votes
6
replies
2.6k
views
gviz ideogramTrack connection error
gviz-package
gviz
updated 7.9 years ago by
Robert Ivanek
▴ 750 • written 7.9 years ago by
alperyilmaz
▴ 20
2
votes
0
replies
2.3k
views
Gviz plot combined with multiple ggplot2 plots
gviz
gviz-package
ggplot2
8.3 years ago
christian.aichmueller
▴ 20
0
votes
0
replies
1.0k
views
Gviz Custom ordering of features in Annotationtrack
gviz
gviz-package
8.4 years ago
mnaymik
• 0
1
vote
1
reply
1.8k
views
Selecting only one transcript in BiomartGeneRegionTrack
gviz
gviz-package
R
updated 8.6 years ago by
Jeremy Ng
▴ 180 • written 8.6 years ago by
klim314
• 0
3
votes
2
replies
2.2k
views
Gviz AnnotationTrack id above feature
gviz-package
gviz
annotation
updated 8.7 years ago by
florian.hahne@novartis.com
★ 1.6k • written 8.7 years ago by
bruce.moran
▴ 30
0
votes
0
replies
1.3k
views
Data grouping with DataTrack or AlignmentTrack classes
gviz
gviz-package
8.7 years ago
jma1991
▴ 70
0
votes
0
replies
1.7k
views
Gviz: control height of items within BiomartGeneRegionTrack (StackedTrack)
Gviz
gviz-package
8.8 years ago
Kort, Eric
▴ 220
2
votes
4
replies
3.7k
views
Error using Gviz and BiomartGeneRegionTrack, version problem?
Gviz-package
biomart
plottracks
ucsctrack
stickleback
updated 8.8 years ago by
florian.hahne@novartis.com
★ 1.6k • written 8.8 years ago by
br
• 0
23 results • Page
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Comment: Bioinformatician at the Lausanne University Hospital
by
eja.ger.m
• 0
For individuals looking to improve communication and collaboration in demanding medical or research environments like the Genetic Medicine …
Answer: NUPOP usage
by
shepherl
4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker?
by
fnfgame
• 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
Erik Wright
▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Michael Love
43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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