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887

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downloads http429 http Bioconductor

15 months ago shepherl 4.2k

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2.7k

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import.bw rtracklayer Windows http

4.0 years ago sla • 0

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6.3k

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import.bw rtracklayer http RStudio

updated 5.0 years ago by Michael Lawrence ★ 11k • written 5.0 years ago by Søren • 0

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1.6k

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genomicdatacommons tcga gdc rest http

updated 6.8 years ago by Sean Davis 21k • written 6.8 years ago by mk ▴ 20

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2.4k

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gviz gviz-package rtracklayer http

7.8 years ago enricoferrero ▴ 680

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3.8k

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arrayexpress xml rcurl http EBI

updated 8.1 years ago by Wolfgang Huber ★ 13k • written 8.1 years ago by Bernd Klaus ▴ 610

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2.5k

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security http source installation

updated 10.4 years ago by Dan Tenenbaum ★ 8.2k • written 10.4 years ago by will.townes • 0

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Comment: Extract snp information from genomic regions with biomaRt -> "oaries_snp" by tomaamylikefood • 0

Using biomaRt to extract SNP information from genomic regions is as simple as setting the correct dataset in this case, and defining your …

Comment: Save the Date for EuroBioC2026 in Turku! by tomaamylikefood • 0

If you re interested in staying productive and entertained while following updates from events like EuroBioC2026, you can Download free And…

Answer: Error installing Seqinfo by fabio.marroni • 0

I am answering my own question. I found the solution thanks to [this post][1], and I am writing here the very simple procedure: 1) Instal…

Comment: Getting a large intercept with DESeq2 by Michael Love 43k

Thanks James -- Denise you can check the "note on factor levels" in the vignette. And I'd recommend `plotCounts()` for looking at individu…

Comment: Getting a large intercept with DESeq2 by James W. MacDonald 68k

As a trivial example, consider this: ``` > model.matrix(~Treatment, data.frame(Treatment = factor(rep(1:3, each = 4)))) (Intercept) Tre…

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Answer: Issues with downloading biomaRt - SeqInfo and S4 Vectors

Issues with downloading biomaRt - SeqInfo and S4 Vectors

Comment: Issues with downloading biomaRt - SeqInfo and S4 Vectors

Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif

Using edgeR or DESeq2 to analyze allele-specific expression?

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