Bioconductor Http

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499

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downloads http429 http Bioconductor

4 months ago shepherl 4.1k

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2.3k

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import.bw rtracklayer Windows http

3.0 years ago sla • 0

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5.1k

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import.bw rtracklayer http RStudio

updated 4.0 years ago by Michael Lawrence ★ 11k • written 4.0 years ago by Søren • 0

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1.3k

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genomicdatacommons tcga gdc rest http

updated 5.9 years ago by Sean Davis 21k • written 5.9 years ago by mk ▴ 20

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1.9k

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gviz gviz-package rtracklayer http

6.8 years ago enricoferrero ▴ 660

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3.2k

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arrayexpress xml rcurl http EBI

updated 7.2 years ago by Wolfgang Huber ★ 13k • written 7.2 years ago by Bernd Klaus ▴ 610

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2.1k

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security http source installation

updated 9.5 years ago by Dan Tenenbaum ★ 8.2k • written 9.5 years ago by will.townes • 0

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Comment: fail to use addPerROIQC in Rmd by joseph.joonsang • 0

Yes, I did. Here is my code. data.path <- "~/GeoMx_best_practice/data/" filepath <- paste(data.path, "Joon_QC_NPC_4_…

Comment: fail to use addPerROIQC in Rmd by shepherl 4.1k

Just covering all bases. You defined spe earlier in the R markdown that is not shown?

Comment: Open Sesame: in what genes are my differentially methylated probes!! by alyssa-daniel • 0

@zhouwanding I have a question regarding DML analysis. I understand the Est_ output is describing the difference in methylation between the…

Comment: DESeq2 dispersion estimates fitting drastically different based on explanatory v by Sam • 0

Here is the explanatory variables![enter image description here][1] uses if that helps address the problem as well [1]: /media/images/…

Comment: Merge Replicates vs Mixed Model by abadgerw • 0

Thanks, @gabrielhoffman My understanding is that both options would still be mixed models: Even with technical replicates (3 wells per d…

Votes

Comment: What type of counts data to import for performing Isoform analysis in edgeR

Answer: What type of counts data to import for performing Isoform analysis in edgeR

Transcript-level differential expression using DESeq2

Comment: What type of counts data to import for performing Isoform analysis in edgeR

Answer: What type of counts data to import for performing Isoform analysis in edgeR

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Popular Question to joseph.joonsang • 0

Popular Question to Hans-Ulrich Klein ▴ 330