Bioconductor Interaction

Showing : interaction • reset

votes

replies

3.3k

views

DifferentialExpression contrasts interaction DESeq2

written 24 months ago by Nicole ▴ 10

votes

693

views

DESeq2 interaction coefficient LinearModel RNASeq

updated 17 months ago by Michael Love 41k • written 17 months ago by Pedro Milanez-Almeida ▴ 10

votes

656

views

interaction DESeq2

updated 21 months ago by swbarnes2 ★ 1.3k • written 21 months ago by Tait • 0

vote

replies

792

views

DESeq2 interaction pairwise

2.7 years ago Lucas • 0

votes

replies

6.0k

views

LRT DESeq2 interaction

updated 3.1 years ago by Kevin Blighe ★ 3.9k • written 3.1 years ago by annamariabugaj ▴ 10

votes

replies

1.1k

views

limma interaction

3.7 years ago Sindre ▴ 110

votes

1.0k

views

DESeq2 interaction differential expression

updated 3.8 years ago by Michael Love 41k • written 3.8 years ago by charles.foster ▴ 160

votes

822

views

mircomb mrna mirna degs interaction

3.8 years ago andreia ▴ 10

vote

replies

1.0k

views

deseq2 interaction model

updated 3.9 years ago by Michael Love 41k • written 3.9 years ago by aec ▴ 90

votes

replies

813

views

graphite interaction

updated 4.0 years ago by gabriele.sales ▴ 100 • written 4.0 years ago by emisecherre • 0

votes

replies

1.4k

views

deseq2 interaction

updated 4.2 years ago by sebastian.lobentanzer ▴ 50 • written 4.2 years ago by ktrns • 0

votes

1.2k

views

random effects interaction limma rna-seq

4.9 years ago flippy23 • 0

votes

732

views

edger deseq2 interaction design matrix

updated 5.2 years ago by James W. MacDonald 65k • written 5.2 years ago by Assa Yeroslaviz ★ 1.5k

votes

979

views

DEXSeq interaction

5.3 years ago zhenzuo2 • 0

votes

replies

854

views

edge differential gene expression timecourse interaction

5.7 years ago rubi ▴ 110

15 results • Page 1 of 1

Recent ...

Replies

Comment: Deseq2. decontXcounts not integers. Useful alternative? by ATpoint ★ 4.0k

I do not know this decontamination tool you use but generally: If these counts are basically "corrected" raw counts in the sense that they'…

Answer: Improving the design matrices vignette in RNAseq123 by Gordon Smyth 50k

Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2) by winwater0928 • 0

Thank you for your comment! I'll review my code from top to bottom.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;

Votes

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

biomaRt error: database disk image is malformed

Comment: biomaRt : No lock file for BiocFileCache

Answer: Cross-species analysis - how to compute the mid parent value?

Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2

Awards • All

Scholar to James W. MacDonald 65k

Supporter to JKim • 0