Bioconductor Metadata

Showing : metadata • reset

vote

replies

1.3k

views

metadata

4.5 years ago Donghui ▴ 10

votes

replies

1.9k

views

rtracklayer Rsamtools GAlignments GRanges metadata

updated 5.6 years ago by Hervé Pagès 16k • written 5.6 years ago by Robert ▴ 10

votes

1.9k

views

deseq2 design metadata

updated 6.0 years ago by sebastian.lobentanzer ▴ 60 • written 6.0 years ago by Assa Yeroslaviz ★ 1.5k

votes

replies

1.6k

views

recount metadata tcga

updated 7.8 years ago by rosabellascottgm • 0 • written 7.8 years ago by Mariela Cortés-López • 0

votes

replies

2.0k

views

variantannotation locatevariants metadata mcols

updated 8.0 years ago by Valerie Obenchain ★ 6.8k • written 8.0 years ago by enricoferrero ▴ 680

votes

replies

6.0k

views

granges metadata

updated 8.6 years ago by Michael Lawrence ★ 11k • written 8.6 years ago by Ryan C. Thompson ★ 7.9k

votes

replies

1.7k

views

metadata grangeslist granges sample

updated 8.6 years ago by Michael Lawrence ★ 11k • written 8.6 years ago by Sim1pall8a • 0

vote

replies

2.5k

views

GRanges metadata subsetting

updated 9.4 years ago by Michael Lawrence ★ 11k • written 9.4 years ago by mdeea123 ▴ 10

votes

replies

2.6k

views

granges metadata coursera

updated 9.6 years ago by Michael Lawrence ★ 11k • written 9.6 years ago by likeeatingpizza ▴ 10

votes

replies

1.8k

views

genomicfeatures txdb maketxdbfromgff metadata

updated 9.6 years ago by Valerie Obenchain ★ 6.8k • written 9.6 years ago by TimothéeFlutre ▴ 80

votes

replies

3.0k

views

variantannotation vranges readvcf readvcfasvranges metadata

10.8 years ago summerela • 0

vote

replies

2.6k

views

grangeslist metadata

11.1 years ago Robert K. Bradley ▴ 40

12 results • Page 1 of 1

Recent ...

Replies

Answer: Question about RE-agnostic mode for intact Hi-C and Micro-C normalization(HiCDCP by victor04052024 • 0

You write quite well, and the content is very interesting. I'll provide you a link to my page [granny 2](https://granny2.io).

Answer: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink by victor04052024 • 0

The information is interesting, and your writing is excellent. I will provide you a link to my website [Baseball bros](https://baseball-gam…

Comment: segfault in edgeR glmQLFit by Gordon Smyth 53k

We have committed a bug fix now to edgeR on both the release and developmental Bioconductor repositories.

Answer: Ensembl site unresponsive via biomaRt by horaortiz8 • 0

I appreciate the link. I'll get in touch with them directly; I wish they had a status page of some kind. https://www.ensembl.org/Help/Cont…

Comment: segfault in edgeR glmQLFit by Mark • 0

Thanks! We had been considering some of these adjustments as well, given the small number of features and total reads. Your advice is well-…

Votes

C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

Awards • All