Showing : pwm • reset
2
votes
2
replies
1.3k
views
universalmotif, question about enrich_motifs function and number of hits returned
universalmotif scanning enrich_motifs PWM
3.9 years ago alexandre.blais ▴ 50
2
votes
0
replies
2.6k
views
motifDb PFM vs JASPAR database PFM: conversion to PWM
pwm pfm jaspar motifdb
updated 7.0 years ago by 0 • written 7.1 years ago by ▴ 50
0
votes
0
replies
1.2k
views
Plotting motif enrichment vs background - Jaspar core vertebrates
pwm motifs jaspar meme motif analysis
7.1 years ago rbronste ▴ 60
2
votes
1
reply
3.0k
views
Error: unable to find an inherited method for function searchSeq for signature matrix
pwm tfbstools jaspar
updated 8.2 years ago by ▴ 20 • written 8.3 years ago by ▴ 50
0
votes
1
reply
1.7k
views
PWM with columns that add up to 1
biostrings seqlogo pwm
updated 9.1 years ago by 700 • written 9.1 years ago by • 0
0
votes
0
replies
1.1k
views
maxScore calculation for 'log2probratio' and 'prob' type PWMs
biostrings pwm
9.3 years ago Stefanie Tauber ▴ 40
0
votes
3
replies
2.0k
views
motif scanning using position frequncy matrix of motif in a given set of DNAstringset sequnces?.
motifdb matchpwm motif pwmenrich pwm
10.1 years ago vinod.acear ▴ 50
7 results • Page 1 of 1
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Comment: EuroBioC2026 abstract submission is open! by TikTsokaasocissalpc • 0
Submitting abstracts for EuroBioC2026 can be exciting but organizing ideas is key. A Random Word Generator [visit][1] can help create uniqu…
Comment: DESeq2 on non-RNASeq counts data by TikTsokaasocissalpc • 0
In data analysis, behavior differences based on data type are common. Similarly, Best EDI Software adapts to non-standard transaction volum…
Comment: blockwiseModule crashes in the end and doesn't generate modules by gexose2839 • 0
Sounds good. @[time][1] [1]: https://timeduration.github.io
Comment: PFAM formats changed - is it still possible to use this with ISA? by TikTsokaasocissalpc • 0
For mobile gaming enthusiasts, 3 Patti Lucky offers a seamless experience, unlike the frustration Harris faced with incompatible PFAM resul…
Answer: segfault in edgeR glmQLFit by Gordon Smyth 53k
Dear Mark, Thank you for providing a reproducible example. I confirm that I can reproduce the segfault myself on my own computer. The prob…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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