Bioconductor Pwm

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1.3k

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universalmotif scanning enrich_motifs PWM

3.8 years ago alexandre.blais ▴ 50

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2.5k

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pwm pfm jaspar motifdb

updated 6.8 years ago by Bioconductor Community 0 • written 7.0 years ago by chrisclarkson100 ▴ 50

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1.2k

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pwm motifs jaspar meme motif analysis

7.0 years ago rbronste ▴ 60

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3.0k

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pwm tfbstools jaspar

updated 8.1 years ago by Ge Tan ▴ 20 • written 8.1 years ago by chrisclarkson100 ▴ 50

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1.7k

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biostrings seqlogo pwm

updated 9.0 years ago by Marcel Ramos 700 • written 9.0 years ago by clausdkuhn • 0

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1.1k

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biostrings pwm

9.2 years ago Stefanie Tauber ▴ 40

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1.9k

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motifdb matchpwm motif pwmenrich pwm

10.0 years ago vinod.acear ▴ 50

7 results • Page 1 of 1

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Comment: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif by Matthew Thornton ▴ 380

WOW! Thank you so much for the information. I will do this.

Comment: "Watched Tags" are being erased rather than updated by RalphSavage99 • 0

Thanks for sharing https://github.com/Bioconductor/support.bioconductor.org/issues/112

Answer: Add additional maintainer for MOFA2 by shepherl 4.2k

These requests are best on the bioc-devel @ r-project.org or a request to maintainer @ bioconductor.org -- We would ideally need the curre…

Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k

Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…

Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k

Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…

Votes

Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif

Using edgeR or DESeq2 to analyze allele-specific expression?

Answer: DESeq2 design for haplotype MPRA

Answer: Failure to download resources (MeSHDb) from AnnotationHub

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