Showing : rankprod • reset
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572
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Shifted volcano plot after RankProd
rankp RankProd
20 months ago Alessia • 0
1
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3
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1.2k
views
How can I run a paired RankProd analysis in R?
RankProd paired RNAseq R
updated 5.2 years ago by 67k • written 5.2 years ago by • 0
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0
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989
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RankProd RP function length error
rankprod rp gr2
updated 6.4 years ago by 43k • written 6.4 years ago by • 0
3
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2
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1.3k
views
RankProd throws "is.infinite(data)" error for type "S4" for differential expression analysis
rankprod limma affy bioconductor microarray
updated 7.5 years ago by 67k • written 7.5 years ago by ▴ 20
0
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7
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1.8k
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RankProd crashing - stability issues?
rankprod crash
7.5 years ago bhgyu ▴ 30
4
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6
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2.6k
views
Bioconductor open source policy
licenses rankprod
updated 7.6 years ago by 67k • written 7.6 years ago by • 0
0
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0
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1.1k
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Dual channel microarray statistics - Rankproducts did not calculate average FC in log scale.
Dual channel microarray Rankprod
7.9 years ago ggyu1215 • 0
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0
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945
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How does specifying an origin increase the power when using RPadvance?
rankprod microarray bioconductor
8.5 years ago johnanthonyholtjr • 0
0
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0
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1.1k
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Regarding the package RankProd
microarray rankprod
8.8 years ago sancharisircar24 • 0
1
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1
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1.1k
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Problem using RankProd
rankprod
updated 9.2 years ago by 67k • written 9.2 years ago by • 0
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0
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1.4k
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RankProd: simultaneously up and down regulated gene
RankProd differential gene expression
9.3 years ago horcsct ▴ 10
0
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0
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1.2k
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Combine RankProd output Tables (up & down)
RankProd
9.3 years ago horcsct ▴ 10
0
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0
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2.2k
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Error while running RankProd RPadvance from 2 origins - invalid 'row.names' length
rankprod microarray
9.5 years ago sumedharoy • 0
5
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2
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2.6k
views
RankProd: Why are p-values=0?
rankprod p-value
updated 9.5 years ago by 67k • written 9.5 years ago by • 0
0
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0
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1.3k
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Possible implementation of two class paired Rank Products in r with package RankProd
RankProd pairedtest bioconductor biologicalreplicates
9.7 years ago svlachavas ▴ 840
0
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0
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1.1k
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Can Rank-production be applied to test the condition's effects on treatments?
RankProd RankProd
10.4 years ago Guest User ★ 13k
0
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1
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1.6k
views
1. comparing chip Information in meta analysis / Rankprod and 2. two color normalization
Normalization probe limma RankProd Normalization probe limma RankProd
updated 10.7 years ago by ▴ 30 • written 10.7 years ago by 52k
0
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1
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1.8k
views
1. comparing chip Information in meta analysis / Rankprod and 2. two color normalization
cdf RankProd cdf RankProd
updated 10.7 years ago by ▴ 30 • written 10.7 years ago by ▴ 190
0
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0
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976
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1. comparing chip Information in meta analysis / Rankprod and 2. two color normalization
RankProd RankProd
10.7 years ago Stefanie Busch ▴ 30
0
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3
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2.5k
views
GEOquerry and virtualArray
RankProd virtualArray RankProd virtualArray
updated 10.7 years ago by 67k • written 10.7 years ago by ▴ 30
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0
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1.4k
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Rankprod- gene appearing in both up and down regulated lists?
RankProd RankProd
11.4 years ago Guest User ★ 13k
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0
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1.1k
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Comparing human and mouse expression directly with RankProd
RankProd RankProd
12.0 years ago Cornwell, Adam ▴ 110
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0
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1.2k
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RankProd absurd results
qPCR RankProd qPCR RankProd
12.1 years ago Guest User ★ 13k
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0
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1.2k
views
RankProd analysis for Agilent Single Color array ??
limma RankProd limma RankProd
12.1 years ago Guest User ★ 13k
0
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0
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1.2k
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RankProd paired-sample analysis
RankProd RankProd
12.4 years ago Maider Muñoz ▴ 20
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0
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1.1k
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RankProd package paired-sample sesign
RankProd RankProd
12.4 years ago Maider Muñoz ▴ 20
0
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1
reply
1.2k
views
meta-analysis with RankProd
RankProd RankProd
updated 12.9 years ago by ▴ 740 • written 12.9 years ago by ▴ 40
0
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1
reply
1.4k
views
Help needed with topGene function of RankProd package
RankProd RankProd
updated 13.3 years ago by ★ 13k • written 13.3 years ago by ▴ 30
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2
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1.7k
views
Missing values - metaArray, GeneMeta, RankProd, metahdep
RankProd GeneMeta metaArray RankProd GeneMeta metaArray
13.4 years ago boczniak767 ▴ 740
0
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0
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956
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Gene IDs returned by RankProd topGene command
RankProd RankProd
14.8 years ago Blumenberg, Miroslav ▴ 30
0
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2
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1.6k
views
Query related to topGene functionality in RankProd library.
Cancer probe RankProd Cancer probe RankProd
updated 15.1 years ago by ▴ 20 • written 15.1 years ago by ▴ 20
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0
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1.3k
views
Query related to topGene functionality in RankProd library.
probe RankProd probe RankProd
15.1 years ago Rohan M ▴ 20
0
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1
reply
1.1k
views
Searching miRNA probe ids and annotating probe id lists
miRNA GO cdf probe affy RankProd miRNA GO cdf probe affy RankProd
updated 15.2 years ago by 21k • written 15.2 years ago by ▴ 10
0
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4
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1.7k
views
use of huex10stv2cdf_1.15.0.tar.gz and human exon array analysis
Annotation cdf limma RankProd Annotation cdf limma RankProd
updated 15.9 years ago by ▴ 70 • written 15.9 years ago by ▴ 190
0
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2
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1.6k
views
use of huex10stv2cdf_1.15.0.tar.gz and human exon array analysis
cdf limma RankProd cdf limma RankProd
updated 15.9 years ago by 67k • written 15.9 years ago by ▴ 70
0
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0
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1.1k
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Rank Products- breast cancer
Cancer RankProd Cancer RankProd
16.6 years ago Eleni Christodoulou ▴ 150
0
votes
3
replies
2.0k
views
Error in RankProd package
limma RankProd limma RankProd
updated 17.8 years ago by ▴ 100 • written 17.8 years ago by ▴ 680
0
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0
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1.1k
views
meaning of pfp in RankProd
RankProd RankProd
17.9 years ago Matthew McCormack ▴ 180
0
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0
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1.1k
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help with RankProd plaase
GO Survival cdf genefilter multtest affy limma RankProd Category affycoretools GO cdf
18.1 years ago Kimpel, Mark W ▴ 890
0
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3
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1.5k
views
Wilcoxon test [was loged data or not loged previous to use normalize.quantile]
Microarray limma RankProd Microarray limma RankProd
updated 19.7 years ago by ▴ 340 • written 19.7 years ago by 52k
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0
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1.0k
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A new package: RankProd
RankProd RankProd
19.8 years ago Fangxin Hong ▴ 810
41 results • Page 1 of 1
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Answer: DESeq error: counts matrix should be numeric, currently it has mode: character by ATpoint ★ 4.6k
R thinks your data are characters (e.g. "1", "2", instead of 1, 2) so given that your `counts_data` indeed only contains counts, do: `mo…
Comment: Any tools to convert .gff to .gtf format by ControlF5 • 0
Yes, the Appsierra team recently built a tool to convert .gff to .gtf format. [ControlF5][1] is providing the best software testing service…
Comment: EuroBioC2024 abstract submission is open! by Alan Downey • 0
EuroBioC2024 has opened its abstract submission process, presenting an exciting opportunity for researchers to contribute to groundbreaking…
Comment: ChAMP.DMR error - Error in makeGenomicRatioSetFromMatrix by O'Brien • 0
Consult the ChAMP.DMR documentation for more information on supported array types and expected data formats: https://bioconductor.org/packa…
Answer: combining raw counts and estimated counts by O'Brien • 0
It is possible to combine raw counts from TCGA and estimated counts from GEO datasets (Kalisto pseudoalignment) while mitigating batch effe…
Votes
A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor
A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor
A: RNA-seq Normalisation - normalise all samples in experiment or only the ones use
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
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