Bioconductor Rcy3

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igraph KEGGgraph RCy3 GraphNEL

4 months ago • updated 3 months ago Arindam ▴ 80

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RCy3

8 months ago Matthew Thornton ▴ 380

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482

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Cytoscape RCy3 RCy

updated 13 months ago by alex.pico ▴ 30 • written 13 months ago by David R ▴ 90

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Network RCy3

updated 13 months ago by alex.pico ▴ 30 • written 13 months ago by David R ▴ 90

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693

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RCy3 Cytohubba

updated 13 months ago by alex.pico ▴ 30 • written 13 months ago by jzhan067 ▴ 10

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Cytoscape RCy3 Networkvisualization WGCNA

20 months ago Ortega-C ▴ 10

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924

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RCy3

updated 2.0 years ago by alex.pico ▴ 30 • written 2.0 years ago by adR ▴ 40

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GEOquery CancerData limma RCy3 CancerInSilico

updated 3.2 years ago by Steve Lianoglou ★ 13k • written 3.2 years ago by Caitlin ▴ 50

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rcy3

updated 4.1 years ago by alex.pico ▴ 30 • written 5.1 years ago by hanna226613 ▴ 10

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Cytoscape Pathways Wikipathways rWikiPathways RCy3

4.2 years ago • updated 4.1 years ago Emilia ▴ 40

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932

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RCy3 Cytoscape R Newick Bioconductor

updated 4.1 years ago by alex.pico ▴ 30 • written 4.5 years ago by ellisjc • 0

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1.7k

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RCy3 Cytoscape Rgraphviz GOstats

5.7 years ago Matthew Thornton ▴ 380

12 results • Page 1 of 1

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Answer: Unused arguments error without used arguments in GSVA? by Axel Klenk ★ 1.0k

Hi, here is a good place to ask questions when encountering problems with GSVA. I cannot reproduce this behaviour with the current release…

Answer: Restricting differential binding analysis to only TSS-proximal regions by Aaron Lun ★ 28k

Seems reasonable to filter out windows outside of the TSS if you don't care about those events. IIRC the `discard` option will ignore any f…

Comment: Sample-specific methylation values using QSEA by User3088 • 0

Thanks Simon. I got the sample-specific methylation values by using '**samples=getSampleNames**' ``` result=makeTable(qs=prad_QSEAset, glm=…

Comment: input for singR function by iamin053 • 0

Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!

Comment: build samplesheet and plot profile by yf • 0

![enter image description here][1] [1]: /media/images/8ea93bd0-bc90-443d-a332-4701f54a

Votes

Unused arguments error without used arguments in GSVA?

Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte

A: Doubt about the "zero expression" genes or genes with no reads at all in the co

Answer: Unable to install nloptr

Answer: ensembldb for Homo Sapiens organism containing superfluous SYMBOL genes?

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