Showing : rcy3 • reset
1
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2
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905
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KEGGgraph result difference
igraph KEGGgraph RCy3 GraphNEL
16 months ago • updated 15 months ago Arindam ▴ 80
2
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2
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1.4k
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Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(paste("networks", net.suid, "tables", tbl, sep = "/"), : object 're…
RCy3
20 months ago Matthew Thornton ▴ 390
1
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1
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763
views
Going back to default settings in RCy3
Cytoscape RCy3 RCy
updated 2.1 years ago by ▴ 30 • written 2.1 years ago by ▴ 90
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1
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1.6k
views
How to select subnetworks, or regions, with a certain number of nodes or edges with RCy3
Network RCy3
updated 2.1 years ago by ▴ 30 • written 2.1 years ago by ▴ 90
1
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1
reply
1.4k
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Cytohubba in RCY3
RCy3 Cytohubba
updated 2.1 years ago by ▴ 30 • written 2.1 years ago by ▴ 10
3
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7
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2.7k
views
"Degree values are the same for all nodes in a network imported from WGCNA to Cytoscape using RCy3. Seeking insights and potential causes."
Cytoscape RCy3 Networkvisualization WGCNA
2.7 years ago Ortega-C ▴ 10
1
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1
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1.3k
views
how to call an app from Cytoscape using R?
RCy3
updated 3.0 years ago by ▴ 30 • written 3.0 years ago by ▴ 40
2
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3
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2.3k
views
Aggregating genes from multiple GSE's, ranking them, then building a PPI network.
GEOquery CancerData limma RCy3 CancerInSilico
updated 4.2 years ago by ★ 13k • written 4.2 years ago by ▴ 50
1
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2
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1.6k
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RCy3 Cytoscape package question
rcy3
updated 5.1 years ago by ▴ 30 • written 6.1 years ago by ▴ 10
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3
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2.0k
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loadTableData function from RCy3 returns "Failed to load data: Provided key columns do not contain any matches"
Cytoscape Pathways Wikipathways rWikiPathways RCy3
5.1 years ago Emilia ▴ 40
0
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1
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1.2k
views
Importing Newick trees in Cytoscape by conversion to igraph via RCy3
RCy3 Cytoscape R Newick Bioconductor
updated 5.1 years ago by ▴ 30 • written 5.5 years ago by • 0
3
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4
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2.1k
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Exporting graphNEL into Cytoscape using RCy3 fails with 'arguments imply differing number of rows'
RCy3 Cytoscape Rgraphviz GOstats
6.7 years ago Matthew Thornton ▴ 390
12 results • Page 1 of 1
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Answer: Justify title track when rotation = 0 by Benson • 0
Navigating title tracks can be tricky, especially with rotation settings. I faced similar confusion [geometry dash free][1] when starting o…
Comment: Justify title track when rotation = 0 by TikTs33ssalpc • 0
It sounds like your track title alignment issue comes from how the title panel anchors and rotates text. When you set rotation , the title …
Comment: Open Positions for Doctoral Researchers in Molecular Medicine by TikTs33ssalpc • 0
This rotation style program sounds like a great way to explore different fields before committing to one. Similarly, apkgamex lets users ex…
Comment: Bioconductor Maintainer Application by TikTs33ssalpc • 0
This compliance focused approach makes a lot of sense. Clear reminders and opt in policies help maintain trust, similar to how users look f…
Comment: Bile acid analysis with limpa by ATpoint ★ 5.0k
Wilcox/Mann-Whitney-U cannot work because it is bound to sample size even when all of group X are lower than all of group Y. At 4 vs 3 the …
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A: DESeq2: Is it possible to convert read counts to expression values via TPM and r
A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen
Comment: limpa analysis advice
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
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