Bioconductor Rlelist

Showing : rlelist • reset

vote

replies

1.2k

views

GenomicRanges RleList

10 months ago story.benjamin ▴ 20

vote

replies

1.4k

views

Views IRanges GRanges RleList

updated 4.4 years ago by Mike Smith ★ 6.6k • written 4.4 years ago by Assa Yeroslaviz ★ 1.5k

votes

replies

1.5k

views

iranges s4vectors rle rlelist

7.6 years ago endrebak85 ▴ 40

votes

replies

2.6k

views

bug genomicranges granges rlelist coverage

updated 8.0 years ago by Hervé Pagès 16k • written 8.0 years ago by xiaotong.yao23 ▴ 10

votes

replies

2.3k

views

delayedarray rlelist rle

updated 8.3 years ago by Peter Hickey ▴ 760 • written 8.3 years ago by davide risso ▴ 980

votes

replies

2.2k

views

genomicranges biocgenerics rlelist genomicvars iranges

updated 8.4 years ago by Hervé Pagès 16k • written 8.4 years ago by Devin King ▴ 20

votes

1.5k

views

rlelist ifelse

updated 9.1 years ago by theobroma22 ▴ 10 • written 9.1 years ago by maltethodberg ▴ 180

votes

1.9k

views

Views genomicalignments IRangesList coverage RleList

updated 9.6 years ago by Hervé Pagès 16k • written 9.6 years ago by ccanchaya • 0

8 results • Page 1 of 1

Recent ...

Replies

Comment: Deseq2 DE analysis of host-pathogen samples (model separately or jointly?) by a2a2ddrhaa • 0

For those taking a break from the lab, the CT777 Game download https://ct7777.pk/ offers a high-performance entry into online mobile gaming…

Answer: Subsetting data verses contrasts [DESeq2]? by ATpoint ★ 5.0k

This has been asked many times before, please search for relevant posts. In short: Generally it is least tedious to not split the data and …

Comment: Bulk RNAseq analysis for by Mariami • 0

Thank you so much for your help! will try to proceed with the suggestion

Comment: Bulk RNAseq analysis for by Mariami • 0

Thank you for the explanation. I understand, although at the moment we are limited in our ability to increase N. My concern came from the o…

Answer: Bulk RNAseq analysis for by Gordon Smyth 53k

All three packages allow paired comparisons, where the clone is the "pair". limma moreover allows mixed models (just run `voomLmFit` with `…

Votes

Comment: Are transformed values from rlog /vst log2 normalized counts?

Are transformed values from rlog /vst log2 normalized counts?

Answer: Bulk RNAseq analysis for

Answer: DiffBind differential analysis

Answer: Limma-voom sample weights and impact on DEG numbers

Awards • All