Bioconductor Systempiper

Showing : systempiper • reset

votes

replies

3.7k

views

systempiper

5.4 years ago Deleted ▴ 70

votes

replies

3.7k

views

deseq2 systempiper Tutorial

7.9 years ago musa ▴ 10

votes

replies

1.5k

views

deseq2 systemPipeR

9.5 years ago Ugo Borello ▴ 340

votes

replies

1.4k

views

systempiper go term

7.9 years ago A Gossner ▴ 50

votes

replies

2.1k

views

R rnaseq tophat summarizeoverlaps systempiper

updated 7.5 years ago by Thomas Girke ★ 1.7k • written 7.5 years ago by abass.conteh • 0

votes

replies

1.7k

views

systempiper edger rna-seq

updated 6.1 years ago by Aaron Lun ★ 28k • written 6.1 years ago by clarisbaby • 0

votes

replies

1.2k

views

runCommandline systemPipeR bash

5.6 years ago rj.innet • 0

votes

replies

980

views

systemPipeRdata systempipeR

2.2 years ago appropiate • 0

votes

replies

1.6k

views

systempiper seeFastqPlot software error ggplot2 geom_histogram

updated 8.3 years ago by Thomas Girke ★ 1.7k • written 8.3 years ago by setarosd • 0

vote

replies

2.0k

views

systempiper run_edgeR

updated 7.6 years ago by Thomas Girke ★ 1.7k • written 7.6 years ago by alexandr.gopanenko ▴ 50

votes

replies

1.2k

views

R edger systemPipeR

7.2 years ago xuertowong • 0

votes

replies

675

views

systempiper

5.7 years ago kimberly.dickson • 0

votes

replies

1.2k

views

systemPipeR rnaseq

5.7 years ago rj.innet • 0

votes

replies

3.0k

views

systemPipeR Bioconductor DiffBind BiocGenerics

updated 3.3 years ago by Martin Morgan 25k • written 3.3 years ago by tina • 0

votes

1.1k

views

systempiper R batchjobs

updated 6.6 years ago by Thomas Girke ★ 1.7k • written 6.6 years ago by tarun2 • 0

votes

764

views

systemPipeR

updated 2.4 years ago by dcassol ▴ 100 • written 2.4 years ago by Bioinformatics ▴ 30

votes

replies

504

views

systemPipeRdata systemPipeR

2.2 years ago appropiate • 0

votes

replies

684

views

predORF systemPipeR ORF prediction

5.1 years ago Mr.RB ▴ 20

18 results • Page 1 of 1

Recent ...

Replies

Comment: Couldn't connect to server while using "pathways" by ATpoint ★ 4.1k

Please understand that we neither can see your screen, nor read minds. You at least need to provide the line of code and the name of the pa…

Answer: Method to find pathways different between 2 groups by Gordon Smyth 50k

> When I search camera limma on pubmed, I found 2 papers I am unclear what point you are trying to make. limma's camera method has been fo…

Comment: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k

limma is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of unavailability.…

Comment: package goseq seems to be not available on the latest version of R by Patrycja ▴ 20

limma package also isn't available.Is there any information when these packages will be available?

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…

Votes

Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-

Handling multiple differential expression comparisons

Answer: fgsea significant result

package goseq seems to be not available on the latest version of R

Awards • All

Scholar to ATpoint ★ 4.1k