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RNA-seq analysis with Bioconductor Carpentries workshop, Boston, Jul 31-Aug 1
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12 months ago
Maria Doyle
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Include your Bioconductor tutorial in Smörgåsbord 2023, May 22-26!
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Maria Doyle
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Maria Doyle
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BioCAsia, 5-6th December 2019, Sydney, Australia
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4.9 years ago
Peter Hickey
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BioCAsia, 29-30th November 2018, Melbourne, Australia
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updated 5.5 years ago by
Gordon Smyth
50k • written 5.7 years ago by
Steve Pederson
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LAST CHANCE: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
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6.3 years ago
mnchoi67
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May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
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6.4 years ago
mnchoi67
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Course: Statistics and Computing in Genome Data Science, July 10-15, 2016
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8.2 years ago
Martin Morgan
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Help with neuroblastoma working group
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Vincent J. Carey, Jr.
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Services/Outreach orientend bioinformatics positions at EMBL - Heidelberg
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Wolfgang Huber
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gr231
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Beginner's guide to DESeq2 pdf link broken
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42k • written 9.6 years ago by
sunshinne
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Course Announcement - Next Generation Data Analysis with R/Bioc (Dec 5-8, 2014)
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9.6 years ago
Thomas Girke
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Answer: Subsetting RNAseq data | voomaByGroup()
by
Gordon Smyth
50k
Judging from your MDS plot, cell types 1 and 2 look radically different, so it would make perfect sense to analyse them separately. There's…
Answer: Numerical differences in DESeq2 output depending on different design matrix cons
by
Michael Love
42k
Yes there can be small numerical differences in the estimated quantities because of how the algorithms decide to stop iterating.
Answer: DESeq2- Mysterious interaction suppresses DEGs
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Michael Love
42k
Removing samples from one group nevertheless changes the variance estimation (dispersion) for all comparisons. So you could have pushed one…
Comment: Ensembl plants at annotationHub?
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Daniele
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Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
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swbarnes2
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If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
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Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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