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vignette
•
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0
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2
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792
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Excluding samples as referenced in SummarizedExperiment vignette
SummarizedExperiment
vignette
2.4 years ago
BioInfoBeginnerrr
• 0
4
votes
5
replies
2.6k
views
Error in the vignette for biomaRt (when accessing an ensembl archive)
biomaRt
vignette
updated 3.3 years ago by
ashleymaeconard
▴ 10 • written 4.7 years ago by
Russ Hyde
▴ 10
2
votes
2
replies
1.1k
views
How to write the installation section in the vignette of a package that has not been sent into Bioconductor yet
newpackage
vignette
installation
updated 4.8 years ago by
shepherl
3.9k • written 4.8 years ago by
Krutik Patel
▴ 10
0
votes
1
reply
963
views
Error executing flowcore vignette
flowcore
vignette
software error
updated 6.8 years ago by
Jiang, Mike
★ 1.3k • written 6.8 years ago by
Robert Baer
▴ 70
7
votes
2
replies
1.4k
views
Duplicated author affiliations in BiocStyle-based HTML document
biocstyle
vignette
updated 7.0 years ago by
Andrzej Oleś
▴ 750 • written 7.0 years ago by
Aaron Lun
★ 28k
0
votes
3
replies
2.5k
views
unable to connect to 'string.uzh.ch' on port 80
STRINGdb
vignette
updated 7.2 years ago by
Gregor Rot
▴ 10 • written 7.2 years ago by
mwinerip
• 0
3
votes
3
replies
1.9k
views
Error running CellMix SampleAnalysis vignette
software error
cellmix
vignette
expressionset
7.5 years ago
gabor.halasz
• 0
2
votes
3
replies
2.4k
views
No color support in ggbio for autoplot
ggbio
autoplot
color
vignette
updated 8.5 years ago by
aaron
▴ 10 • written 8.5 years ago by
timothypyork
• 0
1
vote
2
replies
1.7k
views
GitHub Continuous Integration, unit-tests, vignettes: R Packaging
github
vignette
test
developers
updated 8.6 years ago by
Dan Tenenbaum
★ 8.2k • written 8.6 years ago by
anthonycolombo60
• 0
3
votes
2
replies
1.4k
views
question regarding embedding images in vignette when creating bioconductor package
vignette
updated 9.0 years ago by
Dan Tenenbaum
★ 8.2k • written 9.0 years ago by
KB
▴ 50
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Comment: 'path' must be string
by
James W. MacDonald
66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string
by
cpierce2
• 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest
by
Robert
• 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta
by
Guido Hooiveld
★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta
by
Michael Love
42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
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