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xcms
•
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0
votes
1
reply
1.7k
views
error when reading .mzML with xcms::xcmsSet
software error
R
mzR
xcms
9.2 years ago
buescher
• 0
1
vote
7
replies
3.1k
views
Can XCMS output continuum/profile data to netCDF format?
xcms
convert
protein
updated 9.2 years ago by
Johannes Rainer
★ 2.1k • written 9.2 years ago by
ray.bacala
• 0
0
votes
1
reply
1.6k
views
get LCMS masses with more significant figures
source code
xcms
m/z
groupval
xcmsSet
updated 9.3 years ago by
Johannes Rainer
★ 2.1k • written 9.3 years ago by
juniormbarga
• 0
0
votes
1
reply
1.8k
views
findneutral xcms xcmsSet
R
metabolomics
LC-MS
xcms
readMzXmlData
updated 9.3 years ago by
James W. MacDonald
68k • written 9.3 years ago by
micheleserra
• 0
0
votes
1
reply
2.1k
views
metaMS for analysis of GC-MS data
metaMS
xcms
GC-MS
metabolomics
volatile organic compounds
updated 9.7 years ago by
ron.wehrens
▴ 20 • written 9.7 years ago by
lucie.conchou
• 0
0
votes
6
replies
3.5k
views
Help Error could not find function xcmsSet
xcms
metabolomics
mzr rcpp
ramp
9.8 years ago
dfrtyu
• 0
0
votes
4
replies
3.0k
views
Segfault error when loading xcms and mzR packages
software error
mzr
xcms
9.9 years ago
pmartin
• 0
0
votes
0
replies
1.5k
views
fillPeaks not calculating "intb" values.
xcms
metabolomics
10.0 years ago
Johannes Rainer
★ 2.1k
1
vote
3
replies
3.1k
views
XCMS2 on MSMS data
xcms
metabolomics
massspectrometry
lipidomics
bioconductor
10.1 years ago • updated 10.0 years ago
Titan
• 0
0
votes
3
replies
2.8k
views
Problem with XCMS
xcms
metabolomics
lipidomics
proteomics
massspectrometry
10.1 years ago
Titan
• 0
0
votes
4
replies
3.8k
views
XCMS for targeted metabolomic/lipidomics/proteomics
xcms
metabolomics
lipidomics
statistics
10.1 years ago
Titan
• 0
0
votes
4
replies
3.5k
views
mzR could not be loaded on XCMS
xcms
msdata
mzR
Rcpp
metabolomics
10.1 years ago
Titan
• 0
0
votes
3
replies
4.5k
views
how to import a CDF file in R ?
xcms
metaMS
MSeasy
r
updated 10.4 years ago by
peer.karmaus
• 0 • written 10.4 years ago by
Nemo
▴ 80
0
votes
2
replies
1.8k
views
get LCMS masses with more significant figures with xcmsRaw()
R
xcms
xcmsRaw
LC
updated 10.6 years ago by
Johannes Rainer
★ 2.1k • written 10.6 years ago by
phoenix
• 0
0
votes
3
replies
3.0k
views
Difference between methods getEIC and rawEIC for xcmsRaw classes
xcms
metabolomics
10.8 years ago
Johannes Rainer
★ 2.1k
2
votes
9
replies
3.6k
views
Unexpected total ion count (TIC) with xcms package
xcms
metabolomics
updated 10.8 years ago by
Thomas Lin Pedersen
▴ 70 • written 10.8 years ago by
Johannes Rainer
★ 2.1k
1
vote
3
replies
1.7k
views
Unable to set colors in plotrt function in xcms package
xcms
bug
10.8 years ago
Johannes Rainer
★ 2.1k
1
vote
4
replies
2.9k
views
How to get from xcmsRaw to a xcmsSet
xcms
metabolomics
updated 10.8 years ago by
Thomas Lin Pedersen
▴ 70 • written 10.8 years ago by
Johannes Rainer
★ 2.1k
0
votes
5
replies
2.4k
views
XCMS for LC-MS
xcms
xcms
updated 12.1 years ago by
Bashar Amer
▴ 20 • written 12.1 years ago by
Guest User
★ 13k
0
votes
3
replies
3.0k
views
XCMS query regarding mzXML
xcms
xcms
updated 12.5 years ago by
Laurent Gatto
1.6k • written 12.5 years ago by
Reema Singh
▴ 570
0
votes
6
replies
2.5k
views
error when loading mzR
xcms
mzR
xcms
mzR
updated 12.5 years ago by
Steve Lianoglou
★ 13k • written 12.5 years ago by
Guest User
★ 13k
0
votes
3
replies
3.9k
views
Installation of XCMS / mzR failed
cdf
xcms
BiocInstaller
cdf
xcms
BiocInstaller
updated 13.5 years ago by
James W. MacDonald
68k • written 13.5 years ago by
Johannes Raffler
▴ 20
0
votes
3
replies
2.8k
views
XCMS / mzR / Rcpp dependency issue
xcms
xcms
updated 13.6 years ago by
Laurent Gatto
1.6k • written 13.6 years ago by
Uwe Schmitt
▴ 30
0
votes
1
reply
2.0k
views
problems installing xcms package
cdf
xcms
cdf
xcms
updated 13.9 years ago by
Dan Tenenbaum
★ 8.2k • written 13.9 years ago by
Juliet Hannah
▴ 360
0
votes
1
reply
1.3k
views
help
cdf
xcms
BiocInstaller
cdf
xcms
BiocInstaller
updated 14.1 years ago by
Steve Lianoglou
★ 13k • written 14.1 years ago by
Guest User
★ 13k
0
votes
0
replies
1.6k
views
'Cheminformatics in R' workshop at the EBI: 17-18 May 2010
Metabolomics
Cheminformatics
Visualization
xcms
Metabolomics
Cheminformatics
Visualization
16.0 years ago
Gabriella Rustici
▴ 60
0
votes
0
replies
1.4k
views
problem loading xcms in R after normal installation
xcms
xcms
16.0 years ago
Gertsman, Ilya
▴ 10
0
votes
1
reply
2.1k
views
installing xcms package for R 64-bit
GO
Cancer
cdf
xcms
GO
Cancer
cdf
xcms
updated 16.2 years ago by
Benton, Paul
▴ 10 • written 16.2 years ago by
Mathe, Ewy NIH/NCI [F]
▴ 40
0
votes
1
reply
1.3k
views
Too many open files error with groupName = "all" in biocLite() call on Apple OS X
Cancer
Breast
Biobase
AnnBuilder
xcms
Cancer
Breast
Biobase
AnnBuilder
xcms
updated 19.6 years ago by
Seth Falcon
★ 7.4k • written 19.6 years ago by
Steven McKinney
▴ 310
79 results • Page
2 of 2
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Replies
Comment: soGGi error
by
shepherl
4.3k
We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…
Comment: using limma trend workflow in CAMERA
by
Gordon Smyth
53k
No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.
Comment: Questions about bacon QC and correction on EWAS results
by
Tikaaa2sahaaaq2c
• 0
In the world of mobile games, the 88ef game download has gained traction for its performance driven design [free download][1], similar to …
Comment: using limma trend workflow in CAMERA
by
A.Barden
▴ 20
Do you need to set trend.var=TRUE when using camera in the limma-voom pipeline with RNA-Seq data (as apposed to limma-trend pipeline)?
Comment: Upcoming Ensembl API and data access changes - new blog post available
by
Tikaaa2sahaaaq2c
• 0
Just as the Ensembl team transitions to a new platform for streamlined data access, diners can benefit from a digital newks menu prices con…
Votes
Answer: DiffBind differential analysis
Answer: Limma-voom sample weights and impact on DEG numbers
C: Why limma, edgeR, and DESeq did not implement fold change moderation first?
Comment: using limma trend workflow in CAMERA
C: z-score with DESeq2?
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4.3k
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