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Comment: Comment: How to process and analyze Total RNA-Seq data?
17 months ago mohammedtoufiq91 ▴ 10
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2
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828
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How to process and analyze Total RNA-Seq data?
DESeq2 R edgeR Normalization RNASeq
17 months ago mohammedtoufiq91 ▴ 10
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1.9k
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Comment: Comment: Question on performing filtering by gene expression on a normalized matrix in li
19 months ago mohammedtoufiq91 ▴ 10
0
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1
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1.9k
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Comment: Comment: Question on performing filtering by gene expression on a normalized matrix in li
19 months ago mohammedtoufiq91 ▴ 10
5
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8
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1.9k
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Question on performing filtering by gene expression on a normalized matrix in limma?
expression R filtering limma
19 months ago • updated 17 months ago mohammedtoufiq91 ▴ 10
0
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0
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1.9k
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Comment: Comment: Question on performing filtering by gene expression on a normalized matrix in li
19 months ago mohammedtoufiq91 ▴ 10
0
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1
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1.5k
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Comment: Comment: Question on RNA-Seq single sample data analysis in EdgeR
23 months ago mohammedtoufiq91 ▴ 10
3
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3
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1.5k
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Question on RNA-Seq single sample data analysis in EdgeR
R edgeR limma RNASeq Normalization
updated 23 months ago by 50k • written 23 months ago by ▴ 10
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1.4k
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Comment: Comment: How to best visualize multi-level transcriptomics experiment data?
23 months ago mohammedtoufiq91 ▴ 10
4
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6
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1.4k
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How to best visualize multi-level transcriptomics experiment data?
ggplot2 Transcriptomics Visualization R limma
23 months ago mohammedtoufiq91 ▴ 10
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1.4k
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Comment: Comment: How to best visualize multi-level transcriptomics experiment data?
23 months ago mohammedtoufiq91 ▴ 10
0
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1
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1.4k
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Comment: Comment: How to best visualize multi-level transcriptomics experiment data?
23 months ago mohammedtoufiq91 ▴ 10
0
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0
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1.3k
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Comment: Comment: How to make design matrices or compare contrast in limma
2.0 years ago mohammedtoufiq91 ▴ 10
3
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4
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1.3k
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How to make design matrices or compare contrast in limma
designmatrices differentialexpression makeContrasts limma model.matrix
2.0 years ago mohammedtoufiq91 ▴ 10
0
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0
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1.3k
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Comment: Comment: How to make design matrices or compare contrast in limma
2.0 years ago mohammedtoufiq91 ▴ 10
1
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1
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2.0k
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Comment: Comment: Unlog transformed data in DESeq2
2.4 years ago mohammedtoufiq91 ▴ 10
4
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4
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2.0k
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Unlog transformed data in DESeq2
RNASeq DESeq2 vst rlog Normalization
updated 4 months ago by 50k • written 2.4 years ago by ▴ 10
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0
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2.3k
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Comment: Comment: Errors in Processing GSE36411_non-normalized.txt file of Illumina data using lu
2.4 years ago mohammedtoufiq91 ▴ 10
0
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1
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2.3k
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Comment: Comment: Errors in Processing GSE36411_non-normalized.txt file of Illumina data using lu
2.4 years ago mohammedtoufiq91 ▴ 10
0
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1
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1.1k
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Re-normalize microarray dataset in R
microarray quantile expression R Normalization
updated 2.8 years ago by ▴ 80 • written 2.8 years ago by ▴ 10
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2
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1.8k
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How to adjust and align timepoints on x-axis in the ggplot2
ggplot2 line plot x-axis data frame R
4.4 years ago mohammedtoufiq91 ▴ 10
0
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0
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687
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Unable to obtain the line chart with error envelop in ggplot2 and geom_ribbon()
ggplot2 line chart R geom_ribbon()
4.6 years ago mohammedtoufiq91 ▴ 10
0
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0
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3.2k
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Comment: C: Handle missing values in the z-score matrix while plotting heatmap in the Comple
4.6 years ago mohammedtoufiq91 ▴ 10
0
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1
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3.2k
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Comment: C: Handle missing values in the z-score matrix while plotting heatmap in the Comple
4.6 years ago mohammedtoufiq91 ▴ 10
3
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7
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3.2k
views
Handle missing values in the z-score matrix while plotting heatmap in the ComplexHeatmap
matrix heatmap ComplexHeatmap missing values R
updated 4.6 years ago by ▴ 260 • written 4.6 years ago by ▴ 10
0
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0
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1.5k
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Comment: C: Merging two files based on the identifier column (gene symbols)?
4.6 years ago mohammedtoufiq91 ▴ 10
1
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4
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1.5k
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Merging two files based on the identifier column (gene symbols)?
merge files R packages gene annotations
4.6 years ago mohammedtoufiq91 ▴ 10
0
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0
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1.1k
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Comment: C: Are there any functions to subtract all features(rows) to a particular value(row
4.7 years ago mohammedtoufiq91 ▴ 10
0
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1
reply
1.1k
views
Comment: C: Are there any functions to subtract all features(rows) to a particular value(row
4.7 years ago mohammedtoufiq91 ▴ 10
2
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4
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1.1k
views
Are there any functions to subtract all features(rows) to a particular value(row) in the same data file?
R python normalization matrix
updated 4.7 years ago by ▴ 30 • written 4.7 years ago by ▴ 10
0
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0
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813
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Comment: C: Support for import of custom matrix data in the ddCt R package
4.7 years ago mohammedtoufiq91 ▴ 10
1
vote
2
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813
views
Support for import of custom matrix data in the ddCt R package
ddCt import analysis R qRTPCR
updated 4.7 years ago by ▴ 120 • written 4.7 years ago by ▴ 10
0
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0
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722
views
Sample grouping (phenoData) and visualization in R package- HtqPCR
HtqPCR grouping visualization R phenoData
4.7 years ago mohammedtoufiq91 ▴ 10
0
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0
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963
views
Comment: C: Creation of qPCRset in R for HtqPCR
5.6 years ago mohammedtoufiq91 ▴ 10
0
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3
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963
views
Creation of qPCRset in R for HtqPCR
R bioconductor htqpcr qpcrset object
5.6 years ago mohammedtoufiq91 ▴ 10
85 results • Page 2 of 2
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