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Running ENmix with mouse methylation manifest: readidat error - Error in readmanifest(manifestfile) : length(control.line) == 1 && is.integer(cont…
ENmix
Bioconductor
6 hours ago
minardsmitha
▴ 10
0
votes
1
reply
39
views
recount3 problem downloading data from source sra
recount3
updated 5 hours ago by
Leonardo Collado Torres
★ 1.0k • written 8 hours ago by
PABLO ANTONIO
• 0
0
votes
0
replies
19
views
Conditional analysis
GENESIS
9 hours ago
SuperDad
• 0
0
votes
0
replies
19
views
FindOverlaps, makeVennDiagram and "others"
ATACSeq
peaks
ATAC
ChIPpeakAnno
9 hours ago • updated 7 hours ago
Raghad
• 0
0
votes
1
reply
40
views
Identifying DEGs using limma - NanoString GeoMx-NGS RNA Expression Data
NanoStringNCTools
limma
ExpressionData
RNASeq
edgeR
updated 9 hours ago by
James W. MacDonald
66k • written 10 hours ago by
mohammedtoufiq91
▴ 10
0
votes
1
reply
49
views
Documenting resources in an `ExperimentHub` package?
AnnotationHub
ExperimentHub
updated 8 hours ago by
James W. MacDonald
66k • written 23 hours ago by
Tim Barry
• 0
0
votes
2
replies
69
views
Errors in chromosome annotation-biomaRt
org.Rn.eg.db
biomaRt
written 1 day ago by
landenshanie
▴ 40
0
votes
5
replies
262
views
ChAMP installation issue
Cha
ChAMP
updated 8 hours ago by
shepherl
3.9k • written 8 days ago by
e1271094
• 0
0
votes
2
replies
228
views
Visium RNA
metaMSdata
written 9 weeks ago by
Karlison
• 0
4
votes
3
replies
1.0k
views
BayesSpace parameters for DLPFC Visium data
BayesSpace
written 3.0 years ago by
aspangl1
▴ 30
0
votes
1
reply
726
views
How to arrange multiple plots into one page in NOISeq?
noiseq
RNA-seq
quality control
updated 7 hours ago by
baptiste.bidon
• 0 • written 4.7 years ago by
ag1805x
▴ 80
8
votes
41
replies
5.8k
views
Ensembl plants at annotationHub?
ensembl
ensembldb
plant
arabidopsis thaliana
annotationhub
updated 1 hour ago by
Daniele
• 0 • written 5.5 years ago by
Guido Hooiveld
★ 4.0k
12 results • Page
1 of 1
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Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Thank you so much!
Answer: recount3 problem downloading data from source sra
by
Leonardo Collado Torres
★ 1.0k
Hi, I wasn't able to reproduce the issue on both bioc 3.19 (current release version) and 3.18 (closer to your session info). My guess is…
Answer: Running ENmix with mouse methylation manifest: readidat error - Error in readman
by
minardsmitha
▴ 10
Well it turns out there is a typo in the manifest file name. This particular issue is resolved by correcting the typo. A new error now …
Answer: Documenting resources in an `ExperimentHub` package?
by
James W. MacDonald
66k
The easiest way to do that IMO is to use emacs/ESS (or I believe there is some newfangled thing called RStudio? Not personally familiar, bu…
Comment: ChAMP installation issue
by
shepherl
3.9k
We are still waiting for the goseq to respond to our requests but will take action next week if it is not resolved. ChAMP is currently una…
Votes
Comment: Ensembl plants at annotationHub?
how to control age and gender effect in expression data using DESeq2
Answer: Error retrieving ensembl gene id using biomaRt...
Comment: LRT, more than two conditions and pairwise comparisons
Answer: Control group between 2 batches have different expression in RNAseq data
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mohammedtoufiq91
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