Bioconductor ATAC

Showing : ATAC • reset

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1.0k

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ATACSeq peaks ATAC ChIPpeakAnno

18 months ago Raghad • 0

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1.6k

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rna-seq Read10X_h5 atac modalities

updated 2.7 years ago by James W. MacDonald 68k • written 2.7 years ago by Cynthia • 0

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1.2k

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ATAC DiffBind ATACSeq

updated 2.8 years ago by Rory Stark ★ 5.2k • written 2.8 years ago by Hadar • 0

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1.8k

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diffbind atac

updated 5.5 years ago by Rory Stark ★ 5.2k • written 5.5 years ago by lindsaynhayes • 0

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860

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r DiffBind ATAC

updated 5.7 years ago by Rory Stark ★ 5.2k • written 5.7 years ago by lindsaynhayes • 0

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2.4k

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limma edger atac atac-seq

updated 5.7 years ago by Aaron Lun ★ 29k • written 5.7 years ago by pgugger ▴ 70

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1.2k

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deseq2 design formula design matrix edgeR ATAC

updated 5.9 years ago by Gordon Smyth 53k • written 6.0 years ago by corinne_hutfilz • 0

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1.4k

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Diffbind ATAC batch correction blocking factor

updated 6.3 years ago by Rory Stark ★ 5.2k • written 6.3 years ago by rm1238 • 0

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2.5k

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ATACseqQC ATAC ATACseq software error Tutorial

updated 6.4 years ago by Steve Lianoglou ★ 13k • written 6.4 years ago by mbasam • 0

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4.2k

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subread featurecounts atac

updated 6.6 years ago by Wei Shi ★ 3.6k • written 6.6 years ago by aurel.nagy ▴ 10

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2.0k

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diffbind ATACseq ATAC counts differential analysis

updated 6.7 years ago by Rory Stark ★ 5.2k • written 6.7 years ago by pgontarz ▴ 10

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2.9k

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diffbind atac

updated 6.8 years ago by Rory Stark ★ 5.2k • written 6.8 years ago by paz2005 • 0

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7.0k

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diffbind atac

8.5 years ago niu.shengyong ▴ 10

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5.6k

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ATAC differential binding analysis no replicates DEseq2 chromatin

8.7 years ago BioinfGuru ▴ 70

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1.7k

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Diffbind Atac adapters

updated 8.7 years ago by Rory Stark ★ 5.2k • written 8.7 years ago by BioinfGuru ▴ 70

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3.7k

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atac-seq atac deseq2 sva combat

updated 8.7 years ago by Michael Love 43k • written 8.7 years ago by g.atla ▴ 10

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7.3k

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Chipseq DNAseq ATAC bayespeak narrowpeaks

updated 10.5 years ago by Gordon Smyth 53k • written 10.5 years ago by samuel collombet ▴ 140

17 results • Page 1 of 1

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The Bioconductor version must be compatible with the R version. Bioconductor version 3.18 is compatible with R version 4.3. The Dockerfile …

Answer: Boolean Gate Combination for Any 2 Positive Events in flowWorkspace by Kevin Blighe ★ 4.0k

Your proposed code is correct and will achieve the desired outcome. The boolean filter expression `IFNg & TNFa | IFNg & IL2 | TNFa & IL2` i…

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The discrepancy between `final_exp1` and `final_exp2` could arise from several factors, despite matching dimensions. The `identical()` func…

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Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Post translational modifications and phosphoproteomics in limpa?

Answer: Identifying differentially expressed genes in individual samples from a large co

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