Bioconductor Atac

Showing : Atac • reset

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ATACSeq peaks ATAC ChIPpeakAnno

21 months ago Raghad • 0

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1.8k

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rna-seq Read10X_h5 atac modalities

updated 2.9 years ago by James W. MacDonald 68k • written 2.9 years ago by Cynthia • 0

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1.3k

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ATAC DiffBind ATACSeq

updated 3.0 years ago by Rory Stark ★ 5.3k • written 3.1 years ago by Hadar • 0

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diffbind atac

updated 5.8 years ago by Rory Stark ★ 5.3k • written 5.8 years ago by lindsaynhayes • 0

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901

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r DiffBind ATAC

updated 6.0 years ago by Rory Stark ★ 5.3k • written 6.0 years ago by lindsaynhayes • 0

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2.7k

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limma edger atac atac-seq

updated 6.0 years ago by Aaron Lun ★ 29k • written 6.0 years ago by pgugger ▴ 70

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1.3k

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deseq2 design formula design matrix edgeR ATAC

updated 6.2 years ago by Gordon Smyth 53k • written 6.2 years ago by corinne_hutfilz • 0

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Diffbind ATAC batch correction blocking factor

updated 6.6 years ago by Rory Stark ★ 5.3k • written 6.6 years ago by rm1238 • 0

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ATACseqQC ATAC ATACseq software error Tutorial

updated 6.7 years ago by Steve Lianoglou ★ 13k • written 6.7 years ago by mbasam • 0

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subread featurecounts atac

updated 6.9 years ago by Wei Shi ★ 3.6k • written 6.9 years ago by aurel.nagy ▴ 10

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diffbind ATACseq ATAC counts differential analysis

updated 6.9 years ago by Rory Stark ★ 5.3k • written 7.0 years ago by pgontarz ▴ 10

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diffbind atac

updated 7.0 years ago by Rory Stark ★ 5.3k • written 7.0 years ago by paz2005 • 0

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7.3k

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diffbind atac

8.7 years ago niu.shengyong ▴ 10

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5.8k

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ATAC differential binding analysis no replicates DEseq2 chromatin

9.0 years ago • updated 8.9 years ago BioinfGuru ▴ 70

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1.8k

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Diffbind Atac adapters

updated 8.9 years ago by Rory Stark ★ 5.3k • written 9.0 years ago by BioinfGuru ▴ 70

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atac-seq atac deseq2 sva combat

updated 9.0 years ago by Michael Love 43k • written 9.0 years ago by g.atla ▴ 10

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7.6k

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Chipseq DNAseq ATAC bayespeak narrowpeaks

updated 10.8 years ago by Gordon Smyth 53k • written 10.8 years ago by samuel collombet ▴ 140

17 results • Page 1 of 1

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Comment: Can sample-level weights be used when analysing GSVA scores in limma? by A.Barden ▴ 20

Thanks both for this useful information.

Comment: Reproducibility of code in various Bioconductor versions by Gordon Smyth 53k

SNPlocs.Hsapiens.dbSNP155.GRCh38 is available for download from the same location as always. It has not changed since Bioc 3.20: Presumabl…

Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack by a2a2hd42aa • 0

Similarly, for structural complexity in the [He777 Game][1] APK, having precise control over every detail is what makes a high-performance …

Answer: Issue loading and downloading Bioconductor 3.22 packages after update by strawberry3 • 0

Hi, thank you all for the advice. Using James's advice, I managed to install SNPlocs.Hsapiens.dbSNP155.GRCh38, but it took almost half an …

Answer: Issue loading and downloading Bioconductor 3.22 packages after update by James W. MacDonald 68k

As Robert and ATpoint have mentioned, you need to allow more time to download a large file like this. ``` > options(timeout = 5e5) > l…

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Answer: Can sample-level weights be used when analysing GSVA scores in limma?

Comment: Can sample-level weights be used when analysing GSVA scores in limma?

Answer: Issue loading and downloading Bioconductor 3.22 packages after update

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Scholar to Gordon Smyth 53k

Popular Question to Dario Strbenac ★ 1.6k

Popular Question to chirag.parsania ▴ 10