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News:
New Package Submission Deadline for Bioc Release 3.14
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4.1 years ago
shepherl
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Bioconductor 3.13 New Package Submission Deadline
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News:
Bioconductor Release 3.12 and Bioconductor Devel 3.13 Code Freeze Deadlines!
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4.6 years ago • updated 4.5 years ago
shepherl
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5.1 years ago
shepherl
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News:
Bioc2020 - Call for BOF/HAK/FAQ Sections
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5.6 years ago • updated 5.4 years ago
shepherl
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News:
Import Deadlines for RELEASE 3.11
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5.5 years ago
shepherl
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News:
Important Deadlines for RELEASE
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updated 6.0 years ago by
Martin Morgan
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shepherl
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kayla.interdonato
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shepherl
4.2k
23 results • Page
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Comment: "Watched Tags" are being erased rather than updated
by
shepherl
4.2k
I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112
Comment: "Watched Tags" are being erased rather than updated
by
shepherl
4.2k
we can investigate this issue. thank you for bringing it to our attention
Comment: deseq2 filter the low counts
by
Michael Love
43k
> But within each comparison (contrast), if I trace some DEGs back to the original salmon merged gene counts (or even to normalised counts)…
Comment: deseq2 filter the low counts
by
empty_mt
• 0
Thank you for you suggestion to look at the pre-filtering section in the DESeq2 vignettes - am I missing something? I have 6 treatments, …
Comment: deseq2 filter the low counts
by
Michael Love
43k
Have you seen this part: https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#pre-filtering
Votes
Bioconductor 3.22 Released!
Bioconductor 3.22 Released!
Comment: "Watched Tags" are being erased rather than updated
Comment: deseq2 filter the low counts
Answer: DESeq2 interactions
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