Bioconductor Ensembldb

Showing : Ensembldb • reset

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5.8k

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Ensembl Rstudio ensembldb AnnotationHub ensdb

updated 6 weeks ago by shepherl 3.8k • written 2.3 years ago by jon.klonowski ▴ 40

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4.1k

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biomaRt ensembldb UniProt.ws

updated 6 months ago by Marcel Ramos 690 • written 20 months ago by Recep ▴ 20

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5.5k

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ensembl ensembldb plant arabidopsis thaliana annotationhub

updated 23 days ago by Shiva • 0 • written 5.4 years ago by Guido Hooiveld ★ 3.9k

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1.3k

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ensembldb

updated 8 months ago by James W. MacDonald 65k • written 8 months ago by Max ▴ 10

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298

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ensembldb genomei GenomeInfoDb

11 weeks ago Kai Hu ▴ 70

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489

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Rstudio cDNA ensembldb NCBI

5 months ago • updated 4 months ago R_Page • 0

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195

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ensembldb

updated 3 days ago by James W. MacDonald 65k • written 4 days ago by Fara • 0

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770

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RStudio convert ensembldb NCBI

5 months ago j_denton • 0

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217

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ensembldb biomaRt

updated 10 weeks ago by Robin • 0 • written 11 weeks ago by Pez ▴ 10

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217

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TxDb.Mmusculus.UCSC.mm9.knownGene ensembldb GenomicFeatures Mus_musculus

updated 10 weeks ago by James W. MacDonald 65k • written 11 weeks ago by ramonmassoni ▴ 10

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1.5k

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ensembldb biomaRt

updated 9 months ago by Michael Love 41k • written 9 months ago by Benjamin ▴ 30

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2.6k

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ensembldb SNP SNPData genomes

written 2.2 years ago by Weiqiong • 0

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547

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GO ensembldb

6 months ago Rockbar • 0

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956

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Annotation biomaRt ensembldb

written 2.4 years ago by Lillian • 0

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159

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ensembldb transcriptome genome coordinateconversion

updated 26 days ago by Michael Love 41k • written 29 days ago by saadmurtazakhan ▴ 10

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479

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Rsubread ensembldb

updated 8 months ago by James W. MacDonald 65k • written 9 months ago by Ya • 0

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823

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AnnotationHubSoftware ensembldb

updated 7 months ago by James W. MacDonald 65k • written 7 months ago by cjag • 0

17 results • Page 1 of 1

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Comment: Why p value inconsistent when using different number of pathway score? by Chris • 0

Hi Robert, if two conditions don't have hundreds of differential express genes ( in some conditions such as peripheral blood Alzheimer vs n…

Answer: Dominance Index for Shotgun Metagenomics Data by Leo Lahti ▴ 40

1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …

Answer: PCA plot suggestions by Michael Love 41k

For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10

Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…

Votes

Answer: Dominance Index for Shotgun Metagenomics Data

Answer: Math expression in shapeCustom legend in EnhancedVolcano

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length

Comment: Deseq2. decontXcounts not integers. Useful alternative?

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

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