Showing : FlowCytometry • reset
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News: Online course - FLOW CYTOMETRY DATA ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor FlowCytometryData FlowCytometry
5 months ago info ▴ 10
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Merging 2 staining panels
FlowCytometry flowCore
15 months ago michaela.gregorova13 • 0
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1
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964
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How to modify a compensation matrix in an fcs file
flowCore FlowCytometry
19 months ago aguirre ▴ 20
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How to fix Flow-Data autoplot heat map
FlowCytometry flowCore openCyto ggcyto
19 months ago Dennis.hinkel • 0
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661
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creating a NOT gate for gating out a single quadrant in a quadrant gate openCyto
FlowCytometry Opencyto
updated 19 months ago by ★ 3.9k • written 19 months ago by • 0
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gate_quad_sequential as parent gate for downstream gating in opencyto CSV template
opencyto FlowCytometry
19 months ago Noël • 0
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1.6k
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Error when plotting flow cytometry data
FlowCytometry flowCore ggcyto
updated 21 months ago by ▴ 350 • written 21 months ago by • 0
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581
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Reducing/sampling number of FCS events
FlowCytometry flowCore
2.5 years ago markkelly1983 ▴ 20
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725
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Job: Bioconductor developer
FlowCytometry flowCore
2.5 years ago markkelly1983 ▴ 20
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1.1k
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[flowSOM] extracting data from tree
flowcytometry flowSOM flowSET flowFrame
5.2 years ago fabrizio.benedetti.82 • 0
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2.1k
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spillover::flowCore problem: Error in match(unstained, sampleNames(x))
flowcore spillover flowcytometry
updated 6.3 years ago by • 0 • written 8.3 years ago by • 0
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1.1k
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[flowCore] linearization of logarithmic data seems to be calculated wrong
flowcore flowcytometry
updated 6.4 years ago by ★ 1.3k • written 6.4 years ago by • 0
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1.3k
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Installation of "flowWorkspace" on Ubuntu fails
bioconductor R flowcytometry
7.3 years ago mo • 0
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2.0k
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Scaling fcs files with flowCore
flowCore flowcytometry
8.2 years ago Jiang, Mike ★ 1.3k
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1.9k
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FlowWorkspace and norm2Filter
flowcytometry opencyto flowworkspace flowcore
8.3 years ago Jiang, Mike ★ 1.3k
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1.3k
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FlowViz package question
flowviz flowcytometry
8.3 years ago Jiang, Mike ★ 1.3k
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1.4k
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read.flowSet error Error: vector::_M_range_check
software error read.flowset() read.fcs flowcore flowcytometry
8.3 years ago e.bestion • 0
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1.2k
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openCyto - samples with low cell counts
flowcytometry opencyto
8.4 years ago Jiang, Mike ★ 1.3k
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1.3k
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samples are reordered in read.flowSet
flowcore flowcytometry
8.9 years ago Jiang, Mike ★ 1.3k
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2.0k
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xyplot can't find channel (flowViz)
flowcore flowviz flowcytometry
updated 8.9 years ago by ★ 1.3k • written 8.9 years ago by • 0
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1.3k
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Re: FlowStats help
flowclust opencyto flowcytometry
9.3 years ago Jiang, Mike ★ 1.3k
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1.6k
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flowCore: using read.FCS with which.lines is not time efficient?
flowcore read.FCS flowcytometry
updated 9.4 years ago by ★ 1.3k • written 9.6 years ago by ▴ 10
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1.7k
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News: New Flow Cytometry Data Analysis Framework
flowcore flowcytometry opencyto new News
9.7 years ago Greg Finak ▴ 150
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FlowCore - reading in flowSets
FlowCytometry PROcess flowCore FlowCytometry PROcess flowCore
11.4 years ago Pieter Coussement ▴ 30
24 results • Page 1 of 1
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Comment: gds in GEOmetadb 2023-06-26 version is empty by Frederico Moraes Ferreira ▴ 100
Try axel -n 20 https://gbnci.cancer.gov/geo/GEOmetadb.sqlite.gz
Comment: Most enriched pathway is not expressed when modifying universe parameter by James W. MacDonald 66k
The default for `enrichGO` is to subset to those with a p-value<0.05. You don't adjust that default argument, so you shouldn't have any GO …
Answer: In a 3 group DEG analysis with three batches, can I use 1 group in all three bat by Michael Love 42k
You can compare A and C thanks to the sharing of samples from B across 1, 2 and 3.
Comment: Most enriched pathway is not expressed when modifying universe parameter by adripel • 0
In the enrichGO results we have significant and non-significant enriched terms that are displayed. So why would an enriched term (significa…
Answer: Design formula, numeric contrast, and lfcshrink in deseq2 by Michael Love 42k
For questions about how to construct the correct contrasts correspond to particular hypotheses, I recommend consulting with a local statist…
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Comment: Most enriched pathway is not expressed when modifying universe parameter
Time-course, comparison of two groups
Answer: Behaviour of featureCounts when quantifying multi-mapping reads
Answer: GESA with certain gene list returns no result with human genom, but many result
Answer: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`
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