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FlowCytometry
•
reset
0
votes
0
replies
121
views
Boolean Gate Combination for Any 2 Positive Events in flowWorkspace
flowWorkspace
FlowCytometry
7 weeks ago
Valeria
• 0
0
votes
0
replies
269
views
Trouble with double delimiters in .fcs file (flowCore package)
flowCore
FlowCytometry
FlowCytometryData
7 months ago
vpochic
• 0
0
votes
0
replies
851
views
News:
Online course - FLOW CYTOMETRY DATA ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor
FlowCytometryData
FlowCytometry
20 months ago
info
▴ 10
0
votes
0
replies
756
views
Merging 2 staining panels
FlowCytometry
flowCore
2.5 years ago
michaela.gregorova13
• 0
2
votes
1
reply
1.5k
views
How to modify a compensation matrix in an fcs file
flowCore
FlowCytometry
2.8 years ago
aguirre
▴ 20
0
votes
0
replies
888
views
How to fix Flow-Data autoplot heat map
FlowCytometry
flowCore
openCyto
ggcyto
2.8 years ago
Dennis.hinkel
• 0
1
vote
1
reply
1.2k
views
creating a NOT gate for gating out a single quadrant in a quadrant gate openCyto
FlowCytometry
Opencyto
updated 2.9 years ago by
Kevin Blighe
★ 4.0k • written 2.9 years ago by
Noël
• 0
0
votes
0
replies
793
views
gate_quad_sequential as parent gate for downstream gating in opencyto CSV template
opencyto
FlowCytometry
2.9 years ago
Noël
• 0
2
votes
9
replies
2.7k
views
Error when plotting flow cytometry data
FlowCytometry
flowCore
ggcyto
updated 2.9 years ago by
SamGG
▴ 360 • written 2.9 years ago by
alex
• 0
0
votes
0
replies
899
views
Reducing/sampling number of FCS events
FlowCytometry
flowCore
3.7 years ago
markkelly1983
▴ 20
0
votes
0
replies
1.0k
views
Job:
Bioconductor developer
FlowCytometry
flowCore
3.7 years ago
markkelly1983
▴ 20
0
votes
1
reply
1.5k
views
[flowSOM] extracting data from tree
flowcytometry
flowSOM
flowSET
flowFrame
6.4 years ago
fabrizio.benedetti.82
• 0
0
votes
6
replies
2.7k
views
spillover::flowCore problem: Error in match(unstained, sampleNames(x))
flowcore
spillover
flowcytometry
updated 7.6 years ago by
Samuel Ahuno
• 0 • written 9.5 years ago by
Daniel Prieto
• 0
0
votes
1
reply
1.4k
views
[flowCore] linearization of logarithmic data seems to be calculated wrong
flowcore
flowcytometry
updated 7.6 years ago by
Jiang, Mike
★ 1.3k • written 7.6 years ago by
max.zhao
• 0
0
votes
1
reply
1.5k
views
Installation of "flowWorkspace" on Ubuntu fails
bioconductor
R
flowcytometry
8.6 years ago
mo
• 0
0
votes
2
replies
2.4k
views
Scaling fcs files with flowCore
flowCore
flowcytometry
9.4 years ago
Jiang, Mike
★ 1.3k
0
votes
1
reply
2.2k
views
FlowWorkspace and norm2Filter
flowcytometry
opencyto
flowworkspace
flowcore
9.5 years ago
Jiang, Mike
★ 1.3k
0
votes
1
reply
1.5k
views
FlowViz package question
flowviz
flowcytometry
9.5 years ago
Jiang, Mike
★ 1.3k
0
votes
1
reply
1.8k
views
read.flowSet error Error: vector::_M_range_check
software error
read.flowset()
read.fcs
flowcore
flowcytometry
9.5 years ago
e.bestion
• 0
1
vote
2
replies
1.6k
views
openCyto - samples with low cell counts
flowcytometry
opencyto
9.6 years ago
Jiang, Mike
★ 1.3k
0
votes
1
reply
1.6k
views
samples are reordered in read.flowSet
flowcore
flowcytometry
10.1 years ago
Jiang, Mike
★ 1.3k
0
votes
2
replies
2.3k
views
xyplot can't find channel (flowViz)
flowcore
flowviz
flowcytometry
updated 10.1 years ago by
Jiang, Mike
★ 1.3k • written 10.1 years ago by
ericjkort
• 0
0
votes
0
replies
1.6k
views
Re: FlowStats help
flowclust
opencyto
flowcytometry
10.5 years ago
Jiang, Mike
★ 1.3k
1
vote
1
reply
1.9k
views
flowCore: using read.FCS with which.lines is not time efficient?
flowcore
read.FCS
flowcytometry
updated 10.7 years ago by
Jiang, Mike
★ 1.3k • written 10.8 years ago by
skiaphrene
▴ 10
4
votes
1
reply
2.1k
views
News:
New Flow Cytometry Data Analysis Framework
flowcore
flowcytometry
opencyto
new
News
11.0 years ago
Greg Finak
▴ 150
0
votes
0
replies
1.4k
views
FlowCore - reading in flowSets
FlowCytometry
PROcess
flowCore
FlowCytometry
PROcess
flowCore
12.6 years ago
Pieter Coussement
▴ 30
26 results • Page
1 of 1
Recent ...
Replies
Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
by
James W. MacDonald
68k
Yes. You can infer that by figuring out what each coefficient measures. Here is your design matrix: ``` > targets ID Name phase G…
Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
by
snijesh
▴ 200
I would like to clarify whether the command `res <- results(dds, name = "phaseLP.conditionTreated")` is the correct approach to generate …
Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
by
James W. MacDonald
68k
Not sure I understand. You ask how to do something and then show how one would do so.
Comment: DiffBind getting Fold values of near 0
by
littlefishes20
▴ 10
Same issues. All peaks return to a fold near 0, although they are significant when visualizing in IGV. Please find the MAplot and volcanoPl…
Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
by
snijesh
▴ 200
I have checked DEGs between Solvent Control (SC) of FP and LP and there are noticebale differences in terms of DEGs. ``` # Checking SC in …
Votes
How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?
Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
Can NanoString data be analyzed using DESeq2?
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