Showing : Mouse • reset
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TFutils database
TFutils mouse gene convert
3.6 years ago nicocillari • 0
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AnnotationData package for Affymetrix HT MG-430 PM Array Plate
RNAseq Affymetrix Mouse
updated 4.2 years ago by ★ 4.1k • written 4.2 years ago by • 0
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AnnotationHub timeout for Ensembl Mouse GTF
AnnotationHub Ensembl Mouse AnnotationHub Ensembl
5.0 years ago dmgatti ▴ 10
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Choosing DESeq2 design for mice experiment
deseq2 mouse rnaseq
7.1 years ago Emilie • 0
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org.Mm.eg.db UNIPROT missing values
Annotation mouse UNIPROT
updated 7.3 years ago by ★ 6.6k • written 7.3 years ago by • 0
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Finding orthologous human/mouse ENSEMBL IDs
human mouse ensembl annotationdbi homologue
7.6 years ago • updated 7.5 years ago Keith Hughitt ▴ 180
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Annotation for Mouse Illumina Expression Chip V6.1.1
bead chip Annotation Mouse Lumi probeID2nuID
updated 8.4 years ago by ▴ 120 • written 8.4 years ago by • 0
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News: Ensembl release 82 is out!
biomart ensembl release82 variation mouse News
9.3 years ago Thomas Maurel ▴ 800
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News: Ensembl release 81 is out!
human mouse GRCh38 biomart Ensembl News
updated 9.5 years ago by ▴ 390 • written 9.5 years ago by ▴ 800
9 results • Page 1 of 1
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Answer: DESeq error: counts matrix should be numeric, currently it has mode: character by ATpoint ★ 4.6k
R thinks your data are characters (e.g. "1", "2", instead of 1, 2) so given that your `counts_data` indeed only contains counts, do: `mo…
Comment: Any tools to convert .gff to .gtf format by ControlF5 • 0
Yes, the Appsierra team recently built a tool to convert .gff to .gtf format. [ControlF5][1] is providing the best software testing service…
Comment: EuroBioC2024 abstract submission is open! by Alan Downey • 0
EuroBioC2024 has opened its abstract submission process, presenting an exciting opportunity for researchers to contribute to groundbreaking…
Comment: ChAMP.DMR error - Error in makeGenomicRatioSetFromMatrix by O'Brien • 0
Consult the ChAMP.DMR documentation for more information on supported array types and expected data formats: https://bioconductor.org/packa…
Answer: combining raw counts and estimated counts by O'Brien • 0
It is possible to combine raw counts from TCGA and estimated counts from GEO datasets (Kalisto pseudoalignment) while mitigating batch effe…
Votes
A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor
A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor
A: RNA-seq Normalisation - normalise all samples in experiment or only the ones use
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
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