Bioconductor Mouse

Showing : Mouse • reset

votes

replies

746

views

TFutils mouse gene convert

3.4 years ago nicocillari • 0

votes

replies

1.8k

views

RNAseq Affymetrix Mouse

updated 4.1 years ago by Guido Hooiveld ★ 4.1k • written 4.1 years ago by olrema • 0

vote

replies

2.6k

views

AnnotationHub Ensembl Mouse AnnotationHub Ensembl

4.9 years ago dmgatti ▴ 10

votes

replies

1.3k

views

deseq2 mouse rnaseq

6.9 years ago Emilie • 0

votes

1.9k

views

Annotation mouse UNIPROT

updated 7.1 years ago by Mike Smith ★ 6.6k • written 7.1 years ago by julie.chevalier • 0

votes

7.0k

views

human mouse ensembl annotationdbi homologue

7.4 years ago Keith Hughitt ▴ 180

votes

1.4k

views

bead chip Annotation Mouse Lumi probeID2nuID

updated 8.3 years ago by Andy Lynch ▴ 120 • written 8.3 years ago by smt8n • 0

votes

replies

1.3k

views

biomart ensembl release82 variation mouse News

9.1 years ago Thomas Maurel ▴ 800

votes

replies

3.0k

views

human mouse GRCh38 biomart Ensembl News

updated 9.3 years ago by Sonali Arora ▴ 390 • written 9.3 years ago by Thomas Maurel ▴ 800

9 results • Page 1 of 1

Recent ...

Replies

Comment: GOstats kegg analysis in wheat - help - none of the objects in the first column by GV Yoshikawa • 0

Thank you for the reply. I tried swapping columns before asking, it made no difference. head(keggframeData) path_id kegg…

Answer: Differential Expression Analysis with unbalanced batches without replication bet by Gordon Smyth 51k

> Is there an alternative model or approach in tools like edgeR, limma-voom, or DESeq2 or any other that can handle confounded batch effect…

Comment: BiomaRt Possible Ensembl SSL connectivity problems detected. by Adam • 0

I just found this workaround: httr::set_config(config(ssl_verifypeer = FALSE, ssl_verifyhost = FALSE)) at [this Stack Overflow link][…

Comment: Problem at champ.load by icecreamlover • 0

Hello! Were you able to figure this out? I am running into the same error!

Comment: ChAMP - obtaining beta values using EPICv2 annotation by icecreamlover • 0

Hello, Were you able to fix the error? I used the same document and I am running into the same error. I am curious if you have any feedba…

Votes

A: Up/Down Regulated GeneList from edgeR and R

A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis

Answer: Combining RNAseq and microarray data using edgeR/limma-voom

Answer: How do I merge a list of GRanges?

Awards • All

Teacher to Gordon Smyth 51k

Popular Question to Guido Hooiveld ★ 4.1k