Bioconductor Mouse

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annotation SingleR mouse SingleCellData scRNAseq

8 months ago Muhammad • 0

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954

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TFutils mouse gene convert

4.4 years ago nicocillari • 0

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2.2k

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RNAseq Affymetrix Mouse

updated 5.1 years ago by Guido Hooiveld ★ 4.1k • written 5.1 years ago by olrema • 0

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AnnotationHub Ensembl Mouse AnnotationHub Ensembl

5.9 years ago dmgatti ▴ 10

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deseq2 mouse rnaseq

7.9 years ago Emilie • 0

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Annotation mouse UNIPROT

updated 8.1 years ago by Mike Smith ★ 6.6k • written 8.1 years ago by julie.chevalier • 0

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human mouse ensembl annotationdbi homologue

8.4 years ago Keith Hughitt ▴ 180

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1.7k

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bead chip Annotation Mouse Lumi probeID2nuID

updated 9.3 years ago by Andy Lynch ▴ 120 • written 9.3 years ago by smt8n • 0

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biomart ensembl release82 variation mouse News

10.1 years ago Thomas Maurel ▴ 800

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human mouse GRCh38 biomart Ensembl News

updated 10.3 years ago by Sonali Arora ▴ 390 • written 10.3 years ago by Thomas Maurel ▴ 800

10 results • Page 1 of 1

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Comment: gene Set with high AUC score but no cells assigned to cell type by eja.gssssse.r.m • 0

It sounds like your AUCell results may be showing high AUC scores without cell assignment due to thresholding or scoring cutoffs. Think of …

Answer: "Watched Tags" are being erased rather than updated by shepherl 4.2k

This should now be resolved

Answer: Question about collapsing ASVs by genus level during DESeq2 analysis by Michael Love 43k

I'll just note that microbiome stats folks tend to use other tools than DESeq2. > several ASVs belong to the same genus but are not iden…

Comment: Integration: Paired-end vs healthy single-end from a different source by igkryycpinmshzugby • 0

Yes, Option 1 (technical homogenization) reprocessing paired-end samples as single-end using only R1 is the most defensible approach when l…

Answer: Integration: Paired-end vs healthy single-end from a different source by James W. MacDonald 68k

If by reprocess you mean generate libraries and re-sequence, then that's something you could do. Otherwise the biological and technical dif…

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Bioconductor 3.22 Released!

Comment: "Watched Tags" are being erased rather than updated

Comment: deseq2 filter the low counts

Answer: DESeq2 interactions

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Popular Question to Fred Hutch (Recruiting) ▴ 40