Bioconductor NCBI

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1.1k

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Rstudio cDNA ensembldb NCBI

23 months ago R_Page • 0

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3.5k

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RStudio convert ensembldb NCBI

updated 13 months ago by MauriAndres • 0 • written 2.0 years ago by j_denton • 0

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995

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getGFF NCBI biomartr biomaRt

4.2 years ago Matan G. ▴ 60

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1.5k

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MakeOrgPackageFromNCBI NCBI SQL AnnotationForge

updated 5.5 years ago by James W. MacDonald 68k • written 5.5 years ago by chefer • 0

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ontology edger limma ncbi organism package

updated 5.7 years ago by Gordon Smyth 53k • written 5.7 years ago by babak.loghmani ▴ 20

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2.8k

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rsubread ncbi GRCh38 hg38

updated 9.0 years ago by Wei Shi ★ 3.6k • written 9.0 years ago by jan.soderman • 0

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1.8k

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ncbi sra search

9.8 years ago massacomgrao • 0

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4.6k

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ncbi refseq maketxdbfromgff fetchExtendedChromInfoFromUCSC genomeinfodb

updated 9.8 years ago by Hervé Pagès 16k • written 9.8 years ago by gokcen.eraslan ▴ 10

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4.0k

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microarray normalization ncbi

updated 10.5 years ago by James W. MacDonald 68k • written 10.5 years ago by pankajnarula84 ▴ 20

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1.6k

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annotate ncbi url

10.9 years ago reuma • 0

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Comment: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif by Matthew Thornton ▴ 380

WOW! Thank you so much for the information. I will do this.

Comment: "Watched Tags" are being erased rather than updated by RalphSavage99 • 0

Thanks for sharing https://github.com/Bioconductor/support.bioconductor.org/issues/112

Answer: Add additional maintainer for MOFA2 by shepherl 4.2k

These requests are best on the bioc-devel @ r-project.org or a request to maintainer @ bioconductor.org -- We would ideally need the curre…

Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k

Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…

Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k

Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…

Votes

Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif

Using edgeR or DESeq2 to analyze allele-specific expression?

Answer: DESeq2 design for haplotype MPRA

Answer: Failure to download resources (MeSHDb) from AnnotationHub

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