Showing : NCBI • reset
2
votes
3
replies
1.1k
views
NCBI protein to NCBI cDNA (Ensembl conversions would be great as well) in R
Rstudio cDNA ensembldb NCBI
23 months ago R_Page • 0
4
votes
6
replies
3.5k
views
Conversion between different types of bioinformatic forms. (eg. NCBI protein to Ensembl protein) in R
RStudio convert ensembldb NCBI
updated 13 months ago by • 0 • written 2.0 years ago by • 0
0
votes
0
replies
991
views
getGFFSet function CRASHES R session
getGFF NCBI biomartr biomaRt
4.2 years ago Matan G. ▴ 60
2
votes
4
replies
1.5k
views
MakeOrgPackageFromNCBI SQL error
MakeOrgPackageFromNCBI NCBI SQL AnnotationForge
updated 5.5 years ago by 68k • written 5.5 years ago by • 0
1
vote
5
replies
2.0k
views
Gene Ontology analysis
ontology edger limma ncbi organism package
updated 5.6 years ago by 53k • written 5.7 years ago by ▴ 20
0
votes
4
replies
2.8k
views
Rsubread function buildindex cannot handle the GRCh38.p7 reference from NCBI
rsubread ncbi GRCh38 hg38
updated 9.0 years ago by ★ 3.6k • written 9.0 years ago by • 0
0
votes
0
replies
1.8k
views
Search SRA based on BioSample Attributes
ncbi sra search
9.8 years ago massacomgrao • 0
8
votes
7
replies
4.6k
views
Generating a proper TxDb instance from NCBI GFF Annotations File
ncbi refseq maketxdbfromgff fetchExtendedChromInfoFromUCSC genomeinfodb
updated 9.8 years ago by 16k • written 9.8 years ago by ▴ 10
2
votes
2
replies
4.0k
views
How to Normalize the Microarray Data Obtained from ncbi?
microarray normalization ncbi
updated 10.5 years ago by 68k • written 10.5 years ago by ▴ 20
0
votes
1
reply
1.6k
views
.getNcbiURL returns old NCBI url ?
annotate ncbi url
10.9 years ago reuma • 0
10 results • Page 1 of 1
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Comment: Save the Date: BioC2026 by eja.gsssssswwse.r.m • 0
Que notícia incrivel sobre o BioC2026 Para quem gosta de aproveitar o conteudo online, também e possvel Baixar [snaptube versão antiga][1] …
Comment: Ensembl 115 has been released! by eja.gsssssswwse.r.m • 0
Keeping up with Ensembls latest release ensures access to cutting-edge genomic information. For those balancing research and leisure, a mob…
Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Answer: gene Set with high AUC score but no cells assigned to cell type by Kevin Blighe ★ 4.0k
Hi, You have correctly identified the issue: AUCell's automatic threshold selection is conservative by design, aiming for specificity to…
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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