Showing : NCBI • reset
2
votes
3
replies
1.1k
views
NCBI protein to NCBI cDNA (Ensembl conversions would be great as well) in R
Rstudio cDNA ensembldb NCBI
22 months ago R_Page • 0
4
votes
6
replies
3.3k
views
Conversion between different types of bioinformatic forms. (eg. NCBI protein to Ensembl protein) in R
RStudio convert ensembldb NCBI
updated 12 months ago by • 0 • written 23 months ago by • 0
0
votes
0
replies
938
views
getGFFSet function CRASHES R session
getGFF NCBI biomartr biomaRt
4.1 years ago Matan G. ▴ 60
2
votes
4
replies
1.5k
views
MakeOrgPackageFromNCBI SQL error
MakeOrgPackageFromNCBI NCBI SQL AnnotationForge
updated 5.4 years ago by 68k • written 5.4 years ago by • 0
1
vote
5
replies
2.0k
views
Gene Ontology analysis
ontology edger limma ncbi organism package
updated 5.5 years ago by 53k • written 5.5 years ago by ▴ 20
0
votes
4
replies
2.7k
views
Rsubread function buildindex cannot handle the GRCh38.p7 reference from NCBI
rsubread ncbi GRCh38 hg38
updated 8.9 years ago by ★ 3.6k • written 8.9 years ago by • 0
0
votes
0
replies
1.8k
views
Search SRA based on BioSample Attributes
ncbi sra search
9.7 years ago massacomgrao • 0
8
votes
7
replies
4.4k
views
Generating a proper TxDb instance from NCBI GFF Annotations File
ncbi refseq maketxdbfromgff fetchExtendedChromInfoFromUCSC genomeinfodb
updated 9.7 years ago by 16k • written 9.7 years ago by ▴ 10
2
votes
2
replies
3.9k
views
How to Normalize the Microarray Data Obtained from ncbi?
microarray normalization ncbi
updated 10.4 years ago by 68k • written 10.4 years ago by ▴ 20
0
votes
1
reply
1.6k
views
.getNcbiURL returns old NCBI url ?
annotate ncbi url
10.8 years ago reuma • 0
10 results • Page 1 of 1
Recent ...
Replies
Answer: Help with defining groups by Gordon Smyth 53k
Defining sample groups is separate to reading in the DIA-NN data, because the sample conditions and covariates are not necessarily coded in…
Comment: Sharing a collection of datasets in ExperimentHub by Peter Hickey ▴ 760
The [**scRNAseq**](https://bioconductor.org/packages/scRNAseq/) package ([source on GitHub](https://github.com/LTLA/scRNAseq)) might serve …
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi by ReinholdGaylord99 • 0
Thank you so much! https://www.nature.com/articles/s41467-021-25960-2/ [geometry dash lite](https://geometrydashlite.online)
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by Gordon Smyth 53k
I'm not sure that I understand. You have a dataset that, even after pseudo-bulking, still has 6000 samples? That is surprising. Retaining …
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by abaed • 0
Hello again @gordonsmyth, I've now applied the analysis using a more detailed annotation of cell types/clusters, which includes about 100 …
Votes
Comment: readDNAStringSet with non DNA characters
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Awards • All
Popular Question to Alex • 0
Popular Question to Simon Pearce • 0
Popular Question to hauken_heyken ▴ 80
Popular Question to Robert Baer ▴ 70
Popular Question to Stephen Piccolo ▴ 600
Locations • All
Chile, just now
Barcelona, Spain, 3 hours ago
United States, 4 hours ago
United Kingdom, 5 hours ago
United States, 5 hours ago
Traffic: 1056 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6