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NOISeq
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220
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Inquiring about Comparative Analysis without Replicates in NOIseq R Package
NOISeq
withoutreplicate
Noiseq
updated 3 months ago by
ATpoint
★ 3.6k • written 3 months ago by
Rutuja
• 0
1
vote
1
reply
591
views
NOIseq Probability column
RNAseq
RNASeqData
NOISeq
18 months ago • updated 17 months ago
Pratibha
▴ 10
0
votes
2
replies
811
views
Differential expression on RNAseq without replicates
DESeq2
NOISeq
edgeR
updated 2.9 years ago by
ATpoint
★ 3.6k • written 3.0 years ago by
Themis
• 0
3
votes
6
replies
1.4k
views
deseq2 + filtering low counts with noiseq function
deseq2
noiseq
lowcounts
rnaseq
updated 22 months ago by
Michael Love
41k • written 3.2 years ago by
andreia
▴ 10
0
votes
0
replies
588
views
How to arrange multiple plots into one page in NOISeq?
noiseq
RNA-seq
quality control
4.3 years ago
ag1805x
▴ 80
0
votes
0
replies
532
views
NOISeq 'readData' not writing correctly
software error
NOISeq
4.4 years ago
jledmondson
• 0
0
votes
1
reply
684
views
Is possible to use NOISeq with counts from RSubread?
noiseq
rsubread
tophat
bowtie
bowtie2
4.5 years ago
Marcelo Laia
▴ 450
0
votes
0
replies
814
views
Noiseqbio function (NOISEQ package)
noiseq
logfoldchange
5.6 years ago
Aurora
▴ 20
0
votes
0
replies
887
views
NOISeq: Need help with my data frame
R
noiseq
data.frame
5.8 years ago
aokoro
• 0
0
votes
0
replies
1.4k
views
Problem with heatmap by ComplexHeatmap
complexheatmap
Rstudio
NOISeq
6.2 years ago
Luiz
• 0
0
votes
3
replies
1.4k
views
Is the CPM filtering method from NOISeq unsupervised?
rnaseq
de analysis
gene filtering
noiseq
updated 6.3 years ago by
James W. MacDonald
64k • written 6.3 years ago by
Mau
▴ 50
0
votes
5
replies
3.4k
views
GC content and length bias correction with DESeq2 using cqn normalization factor matrix
deseq2
cqn
noiseq
updated 6.6 years ago by
Michael Love
41k • written 6.6 years ago by
glmazzo
▴ 10
0
votes
0
replies
1.2k
views
NOISeq error message while using ARSyNseq batch correction function
noiseq
batch effect
ARSyNseq
8.1 years ago
lina.faller
• 0
0
votes
0
replies
927
views
Question: type of NOISeq package input file
RNASeq
NOISeq
RNASeq
NOISeq
10.8 years ago
Guest User
★ 12k
0
votes
2
replies
2.5k
views
NOISeq initialization problem
NOISeq
NOISeq
updated 11.2 years ago by
Dan Tenenbaum
★ 8.2k • written 11.2 years ago by
Guest User
★ 12k
0
votes
4
replies
1.8k
views
NOISeq installation error
NOISeq
NOISeq
updated 11.2 years ago by
Sean Davis
21k • written 11.2 years ago by
Fatemehsadat Seyednasrollah
▴ 260
0
votes
0
replies
1.1k
views
NOISeq-real input parameters
NOISeq
NOISeq
11.7 years ago
Guest User
★ 12k
17 results • Page
1 of 1
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Replies
Answer: NCBI protein conversion to CDNA and NCBI gene (in R)
by
James W. MacDonald
64k
I already showed you how to do this for gene symbols, and it's analogous for any other annotation ID. Please see the `AnnotationDbi` [vigne…
Comment: Obtaining rsIDs with ENSG and variant ID information
by
Robert Castelo
★ 3.0k
This is a large package, and when downloading and installing large packages it's often the case to get timeouts. Try setting a longer time …
Comment: How does Deseq2 deal with the row with zero when calculating size factors
by
ATpoint
★ 3.6k
> Because I found that if there is at least one gene without zero among all of the samples, the deseq2 runs smoothly. No, it doesn't. ``…
Comment: Obtaining rsIDs with ENSG and variant ID information
by
bd2000
• 0
Thank you for your answer. I've tried to download the package but it didn't work: Error in download.file(url, destfile, method, mode =…
Answer: List of Deprecated Packages for Bioc3.18
by
shepherl
3.6k
biomvRCNS has been fixed and is undeprecated
Votes
Answer: biomaRt not working - lazy table error
Answer: Confused about the CPM and TMM normalization in edgeR
Answer: Differential gene expression analysis
Comment: Why is DMRcate not available for Bioconductor version 3.18?
Comment: Why is DMRcate not available for Bioconductor version 3.18?
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