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If I understand correctly, I think if I keep track of the full lineage, I shouldn't have any risk of collapsin…
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Hello, I was also wondering about the same issue. Did you figure it out?
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FWIW: This seems to be due to architectural differences between two compute nodes I was running on, specifically with the DESeq2:::fitNbino…
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This has to do with the fact that some taxonomies reuse names at the same rank level. Common examples in the SILVA taxonomy are "Incertae S…
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