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NOISeq
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459
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Inquiring about Comparative Analysis without Replicates in NOIseq R Package
NOISeq
withoutreplicate
Noiseq
updated 8 months ago by
ATpoint
★ 4.1k • written 9 months ago by
Rutuja
• 0
1
vote
1
reply
759
views
NOIseq Probability column
RNAseq
RNASeqData
NOISeq
23 months ago • updated 22 months ago
Pratibha
▴ 10
3
votes
6
replies
1.7k
views
deseq2 + filtering low counts with noiseq function
deseq2
noiseq
lowcounts
rnaseq
updated 2.3 years ago by
Michael Love
41k • written 3.6 years ago by
andreia
▴ 10
0
votes
2
replies
912
views
Differential expression on RNAseq without replicates
DESeq2
NOISeq
edgeR
updated 3.4 years ago by
ATpoint
★ 4.1k • written 3.4 years ago by
Themis
• 0
0
votes
0
replies
683
views
How to arrange multiple plots into one page in NOISeq?
noiseq
RNA-seq
quality control
4.7 years ago
ag1805x
▴ 80
0
votes
0
replies
656
views
NOISeq 'readData' not writing correctly
software error
NOISeq
4.8 years ago
jledmondson
• 0
0
votes
1
reply
820
views
Is possible to use NOISeq with counts from RSubread?
noiseq
rsubread
tophat
bowtie
bowtie2
4.9 years ago
Marcelo Laia
▴ 450
0
votes
0
replies
954
views
Noiseqbio function (NOISEQ package)
noiseq
logfoldchange
6.0 years ago
Aurora
▴ 20
0
votes
0
replies
992
views
NOISeq: Need help with my data frame
R
noiseq
data.frame
6.3 years ago
aokoro
• 0
0
votes
0
replies
1.6k
views
Problem with heatmap by ComplexHeatmap
complexheatmap
Rstudio
NOISeq
6.6 years ago
Luiz
• 0
0
votes
3
replies
1.5k
views
Is the CPM filtering method from NOISeq unsupervised?
rnaseq
de analysis
gene filtering
noiseq
updated 6.7 years ago by
James W. MacDonald
65k • written 6.7 years ago by
Mau
▴ 50
0
votes
5
replies
3.7k
views
GC content and length bias correction with DESeq2 using cqn normalization factor matrix
deseq2
cqn
noiseq
updated 7.0 years ago by
Michael Love
41k • written 7.0 years ago by
glmazzo
▴ 10
0
votes
0
replies
1.3k
views
NOISeq error message while using ARSyNseq batch correction function
noiseq
batch effect
ARSyNseq
8.5 years ago
lina.faller
▴ 10
0
votes
0
replies
1.0k
views
Question: type of NOISeq package input file
RNASeq
NOISeq
RNASeq
NOISeq
11.2 years ago
Guest User
★ 13k
0
votes
2
replies
2.7k
views
NOISeq initialization problem
NOISeq
NOISeq
updated 11.6 years ago by
Dan Tenenbaum
★ 8.2k • written 11.6 years ago by
Guest User
★ 13k
0
votes
4
replies
2.0k
views
NOISeq installation error
NOISeq
NOISeq
updated 11.6 years ago by
Sean Davis
21k • written 11.6 years ago by
Fatemehsadat Seyednasrollah
▴ 260
0
votes
0
replies
1.1k
views
NOISeq-real input parameters
NOISeq
NOISeq
12.1 years ago
Guest User
★ 13k
17 results • Page
1 of 1
Recent ...
Replies
Comment: Once again a "Model matrix not full rank"
by
James W. MacDonald
65k
You already ran a temporal assay. Now you can compare each time point to the baseline. The interaction term is only applicable if you have…
Comment: Timecourse RNASeq analysis
by
Aurora
• 0
I managed to run ImpulseDE2 as I am interested in getting significant gene changes over time. Now I would like to run deseq as well and com…
Comment: Once again a "Model matrix not full rank"
by
arfranco
▴ 130
But.. How to run a temporal assay?
Comment: Deseq2 and Normalization of RNA sequencing data
by
kcarey
• 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP
by
Gordon Smyth
50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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