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Noiseq
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475
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Inquiring about Comparative Analysis without Replicates in NOIseq R Package
NOISeq
withoutreplicate
Noiseq
updated 9 months ago by
ATpoint
★ 4.1k • written 9 months ago by
Rutuja
• 0
1
vote
1
reply
768
views
NOIseq Probability column
RNAseq
RNASeqData
NOISeq
23 months ago
Pratibha
▴ 10
0
votes
2
replies
917
views
Differential expression on RNAseq without replicates
DESeq2
NOISeq
edgeR
updated 3.4 years ago by
ATpoint
★ 4.1k • written 3.4 years ago by
Themis
• 0
3
votes
6
replies
1.7k
views
deseq2 + filtering low counts with noiseq function
deseq2
noiseq
lowcounts
rnaseq
updated 2.3 years ago by
Michael Love
42k • written 3.7 years ago by
andreia
▴ 10
0
votes
0
replies
686
views
How to arrange multiple plots into one page in NOISeq?
noiseq
RNA-seq
quality control
4.7 years ago
ag1805x
▴ 80
0
votes
0
replies
665
views
NOISeq 'readData' not writing correctly
software error
NOISeq
4.9 years ago
jledmondson
• 0
0
votes
1
reply
830
views
Is possible to use NOISeq with counts from RSubread?
noiseq
rsubread
tophat
bowtie
bowtie2
4.9 years ago
Marcelo Laia
▴ 450
0
votes
0
replies
960
views
Noiseqbio function (NOISEQ package)
noiseq
logfoldchange
6.1 years ago
Aurora
▴ 20
0
votes
0
replies
995
views
NOISeq: Need help with my data frame
R
noiseq
data.frame
6.3 years ago
aokoro
• 0
0
votes
0
replies
1.6k
views
Problem with heatmap by ComplexHeatmap
complexheatmap
Rstudio
NOISeq
6.6 years ago
Luiz
• 0
0
votes
3
replies
1.5k
views
Is the CPM filtering method from NOISeq unsupervised?
rnaseq
de analysis
gene filtering
noiseq
updated 6.8 years ago by
James W. MacDonald
65k • written 6.8 years ago by
Mau
▴ 50
0
votes
5
replies
3.7k
views
GC content and length bias correction with DESeq2 using cqn normalization factor matrix
deseq2
cqn
noiseq
updated 7.0 years ago by
Michael Love
42k • written 7.0 years ago by
glmazzo
▴ 10
0
votes
0
replies
1.3k
views
NOISeq error message while using ARSyNseq batch correction function
noiseq
batch effect
ARSyNseq
8.5 years ago
lina.faller
▴ 10
0
votes
0
replies
1.0k
views
Question: type of NOISeq package input file
RNASeq
NOISeq
RNASeq
NOISeq
11.2 years ago
Guest User
★ 13k
0
votes
2
replies
2.7k
views
NOISeq initialization problem
NOISeq
NOISeq
updated 11.6 years ago by
Dan Tenenbaum
★ 8.2k • written 11.6 years ago by
Guest User
★ 13k
0
votes
4
replies
2.0k
views
NOISeq installation error
NOISeq
NOISeq
updated 11.6 years ago by
Sean Davis
21k • written 11.6 years ago by
Fatemehsadat Seyednasrollah
▴ 260
0
votes
0
replies
1.1k
views
NOISeq-real input parameters
NOISeq
NOISeq
12.2 years ago
Guest User
★ 13k
17 results • Page
1 of 1
Recent ...
Replies
Comment: Can't post a question containing code?
by
NATASHA
• 0
did you find a solution? I´m having the same problem
Comment: error
by
NATASHA
• 0
Please ignore, i didnt copy all the scrip
Comment: Extremely small p-values using Limma for proteomic data
by
James W. MacDonald
65k
If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>
Comment: How to use spike-in information (sequences from another species) with DESeq2::DE
by
maria.soler
• 0
Hi, I have a question barely related to this topic. Do you use a custom reference genome combining your organism and the one used as a spik…
Votes
A: AIC-like measure for DESeq2
Comment: Extremely small p-values using Limma for proteomic data
Comment: Log-cpm values from limma
Comment: Log-cpm values from limma
Comment: deseq2 results
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