Bioconductor RNA-SEQ

Showing : RNA-SEQ • reset

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GeneExpression GenomicFeatures RNA-Seq TPM

updated 7 months ago by Gordon Smyth 50k • written 7 months ago by gingergeiger22 • 0

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7.8k

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deseq2 edgeR rna-seq

updated 22 days ago by Elizabeth • 0 • written 8.8 years ago by gthm ▴ 30

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353

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rna-seq edgeR

updated 19 days ago by Gordon Smyth 50k • written 4 weeks ago by Netanel • 0

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3.5k

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RNA-seq featureCounts ht-seq

written 3.8 years ago by ag1805x ▴ 80

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207

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RNA-seq DESeq2

updated 5 days ago by ATpoint ★ 4.1k • written 7 days ago by Reza • 0

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721

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RNA-seq DESeq2

7 months ago • updated 6 months ago ar14g12 • 0

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1.2k

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filtering RNA-Seq CPM edgeR filterByExpr

updated 11 months ago by Gordon Smyth 50k • written 11 months ago by mohammedtoufiq91 ▴ 10

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697

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rna-seq salmon fishpond swish

updated 10 months ago by Michael Love 42k • written 11 months ago by samuelcjx • 0

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663

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DEXSeq RNA-seq DESeq2

updated 8 months ago by Alejandro Reyes ★ 1.9k • written 8 months ago by Alice • 0

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883

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BatchEffect lfcshrink RNA-seq DESeq2

9 months ago Eva ▴ 10

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316

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RNA-Seq WGCNA Worms

5 months ago davca • 0

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2.3k

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Spike-in RNASeqR DESeq2 Normalization rna-seq

updated 8 months ago by manuel.fernandez • 0 • written 2.1 years ago by cicely.day • 0

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160

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rna-seq duplicateCorrelation limma voom

1 day ago • updated 23 hours ago Dylan.Sheerin • 0

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912

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correlation pearsoncorrelation rna-seq differential gene expression

updated 4 months ago by ATpoint ★ 4.1k • written 6.1 years ago by saad_k6 • 0

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2.2k

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isoformswitchanalyzeR rna-seq splice-variants

written 5.1 years ago by saddamhusain77 • 0

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1.2k

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gage rna-seq pathwayanalysis

updated 12 months ago by Rob • 0 • written 3.5 years ago by microPhD • 0

16 results • Page 1 of 1

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Comment: deseq2 results by swbarnes2 ★ 1.4k

Ask the people who made the libraires if there was anything unusual in the QC of the outlier sample. Try to figure out what biologically …

Comment: Can't post a question containing code? by NATASHA • 0

did you find a solution? I´m having the same problem

Comment: error by NATASHA • 0

Please ignore, i didnt copy all the scrip

Comment: Extremely small p-values using Limma for proteomic data by James W. MacDonald 65k

If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>