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updated 18 months ago by
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Comment: Extremely small p-values using Limma for proteomic data
by
Abbey
•
0
Thank you James! This worked to fix the p-values. However, the plot still looks one-sided... any idea what's going on with the left side?…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
•
0
That ll be helpful. Thank you.
Comment: Log-cpm values from limma
by
Shaimaa Gamal
•
0
I have performed RUVg correction and extracted W, factors of unwanted variation.
According to limma guide,
> In the limma approach
to RNA…
Comment: DSS CpG coverage threshold
by
j.gilbert
•
0
Might be a bit late for the original poster :') but in case anyone else is wondering, the DSS user guide says:
*Q: Do I need to filter out…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Segmentation is of the whole genome, I'll write some code for doing this later today.
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