Bioconductor RNAseqRData

Showing : RNAseqRData • reset

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microRNA gene RNASeqRData edgeR geneontology

2.4 years ago faiza • 0

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959

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find RNASeqRData

updated 2.4 years ago by ATpoint ★ 4.8k • written 2.4 years ago by yuhang • 0

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2.1k

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RNASeqRData TPM

updated 2.5 years ago by ATpoint ★ 4.8k • written 2.5 years ago by prashali.bansal ▴ 10

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641

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RNASeq RNASeqData RNASeqRData

2.6 years ago marymshahi2021 • 0

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837

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RNAseqRData DeSeq2

updated 3.0 years ago by Michael Love 43k • written 3.0 years ago by Hannah • 0

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4.3k

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RNASeqRData

updated 3.1 years ago by Michael Love 43k • written 3.1 years ago by beslinail • 0

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1.1k

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RNASeqRData edgeR RNASeqR RNASeqData

updated 3.1 years ago by Gordon Smyth 52k • written 3.1 years ago by vikycairoli • 0

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1.2k

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RNASeqRData combat_Seq BatchEffect

3.5 years ago • updated 3.2 years ago zeegzaag • 0

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1.1k

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RNASeqRData limma RNASeq RNASeqR

updated 4.0 years ago by Gordon Smyth 52k • written 4.0 years ago by Rita • 0

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3.4k

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RNASeqRData GO

4.1 years ago Wuschel ▴ 10

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969

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RNAinteract rnaseqGene RNASeqRData rnaseqcomp

4.1 years ago Bogdan ▴ 670

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1.4k

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Deseq2 RNASeqRData unbalancedsamplesize

updated 2.8 years ago by Michael Love 43k • written 4.1 years ago by Cihat • 0

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2.5k

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RiboProfiling DESeq2 Bioconductor RNASeqRData

updated 2.4 years ago by Kevin Blighe ★ 4.0k • written 4.2 years ago by Taufiq • 0

13 results • Page 1 of 1

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Answer: DESeq2 by ATpoint ★ 4.8k

Time courses are often inevitable batches but you should have done the library prep at the same day, just extract RNA per day. If not then …

Comment: Package developing and interoperation with Bioconductor by slizchap • 0

Thank you so much for your answer. This was very useful, I will optimize my functions so they can handle SE objects.

Comment: Package developing and interoperation with Bioconductor by slizchap • 0

Thank you so much for your answer, very useful!

Comment: Error in H5Dclose(h5dataset) when trying to read in kallisto h5 files by Mike Smith ★ 6.6k

Tricky to try and debug this without some example files to work with. Can you provide the output of `traceback()` called immediately after…

Answer: Mismatch between Illumina Mouse Methylation BeadChip annotation and genome brows by James W. MacDonald 68k

The annotation data that is provided for this array is simply a repackaging of data that we get from Illumina, so any apparent inconsistenc…

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Is it possible to speed up VariantAnnotation's rowRanges function when converting to a dataframe?

Answer: Is it possible to speed up VariantAnnotation's rowRanges function when convertin

Comment: ComBat with repeated measures

Answer: Package developing and interoperation with Bioconductor

Answer: CpGs with genomic positions greater than the chromosome size in EPICv2?

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