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RNAseqRData
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1
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4
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1.5k
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RNA-seq analysis between a wildtype vs a double microRNA kockout mouse brain
microRNA
gene
RNASeqRData
edgeR
geneontology
3.0 years ago
faiza
• 0
1
vote
3
replies
1.1k
views
What should I do with RNA-Seq data to get a gene that work?
find
RNASeqRData
updated 3.0 years ago by
ATpoint
★ 5.0k • written 3.0 years ago by
yuhang
• 0
1
vote
4
replies
2.5k
views
merge TPM values for same geneID
RNASeqRData
TPM
updated 3.1 years ago by
ATpoint
★ 5.0k • written 3.1 years ago by
prashali.bansal
▴ 10
0
votes
0
replies
735
views
how to create PHENO_DATA
RNASeq
RNASeqData
RNASeqRData
3.2 years ago
marymshahi2021
• 0
0
votes
1
reply
958
views
DeSeq2 timecourse analysis
RNAseqRData
DeSeq2
updated 3.6 years ago by
Michael Love
43k • written 3.6 years ago by
Hannah
• 0
0
votes
17
replies
4.8k
views
results(dds) error: couldn't find results. you should first run DESeq()
RNASeqRData
updated 3.7 years ago by
Michael Love
43k • written 3.7 years ago by
beslinail
• 0
1
vote
1
reply
1.2k
views
edgeR for SDE analysis
RNASeqRData
edgeR
RNASeqR
RNASeqData
updated 3.7 years ago by
Gordon Smyth
53k • written 3.7 years ago by
vikycairoli
• 0
1
vote
2
replies
1.4k
views
Is 100K genes too many to run ComBat_seq on?
RNASeqRData
combat_Seq
BatchEffect
4.1 years ago • updated 3.8 years ago
zeegzaag
• 0
0
votes
1
reply
1.2k
views
Limma Voom Design and Contrast Matrix- Can my parameter also be a factor?
RNASeqRData
limma
RNASeq
RNASeqR
updated 4.6 years ago by
Gordon Smyth
53k • written 4.6 years ago by
Rita
• 0
2
votes
2
replies
3.7k
views
How to download KEGG pathways for list of enriched genes
RNASeqRData
GO
4.7 years ago
Wuschel
▴ 10
0
votes
0
replies
1.1k
views
display .CT files in a BioC package
RNAinteract
rnaseqGene
RNASeqRData
rnaseqcomp
4.7 years ago
Bogdan
▴ 670
4
votes
4
replies
1.6k
views
DEseq2: working with unbalanced number of sample in tumor study?
Deseq2
RNASeqRData
unbalancedsamplesize
updated 3.5 years ago by
Michael Love
43k • written 4.8 years ago by
Cihat
• 0
1
vote
5
replies
2.8k
views
How can I use bioconductor and Deseq2 in linux ubuntu 18
RiboProfiling
DESeq2
Bioconductor
RNASeqRData
updated 3.0 years ago by
Kevin Blighe
★ 4.0k • written 4.8 years ago by
Taufiq
• 0
13 results • Page
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Comment: Save the Date: BioC2026
by
eja.gsssssswwse.r.m
• 0
Que notícia incrivel sobre o BioC2026 Para quem gosta de aproveitar o conteudo online, também e possvel Baixar [snaptube versão antiga][1] …
Comment: Ensembl 115 has been released!
by
eja.gsssssswwse.r.m
• 0
Keeping up with Ensembls latest release ensures access to cutting-edge genomic information. For those balancing research and leisure, a mob…
Answer: After running samtools, the featureCounts command crashed.
by
Kevin Blighe
★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot
by
Kevin Blighe
★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Answer: gene Set with high AUC score but no cells assigned to cell type
by
Kevin Blighe
★ 4.0k
Hi, You have correctly identified the issue: AUCell's automatic threshold selection is conservative by design, aiming for specificity to…
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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