Showing : SystemsBiology • reset
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News: Course - Network Analysis in Systems Biology with R/Bioconductor
Bioconductor Network RNASeqData SystemsBiology
9 months ago info ▴ 10
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Is there any description available for KEGG Pathway Edge Types
KEGG SystemsBiology KEGGgraph ontology
18 months ago Wuschel ▴ 10
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Job: Postdoctoral Researcher in the Computational Systems Pharmacology Research Group at University of Turku, Finland
systemsbiology network analysis drugvsdisease Job
7.9 years ago jing.tang • 0
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Job: Senior Postdoctoral Fellow in Computational Biology/Bioinformatics : Adelaide, Australia
postdoc bioinformatics network analysis australia systemsbiology Job
8.0 years ago david.lynn • 0
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Job: Postdoctoral Research Fellow in Bioinformatics – Systems Biology of Childhood Cancer
bioinformatics systemsbiology cancer job austria Job
8.8 years ago • updated 8.7 years ago heinrich.kovar ▴ 10
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Job: Postdoctoral Research Fellow in Bioinformatics - Institute of Medical Biostatistics, Epidemiology and Informatics (IMBEI), Mainz, Germany
bioinformatician job rnaseq statistics systemsbiology Job
9.0 years ago Federico Marini ▴ 150
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Job: Post-Doctoral Research Fellow - Patient Genomics Data Visualization
visualization genomics personalized medicine systemsbiology js Job
9.1 years ago Hamid Bolouri ▴ 50
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Job: Research Associate (Postdoctoral) position at the MRC Cancer Unit, University of Cambridge, UK.
job computational biology genomics cancer systemsbiology Job
9.4 years ago Shamith.Samarajiwa ▴ 180
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Job: Faculty Position in Computational Systems Biology at UC Riverside
systemsbiology bioinformatics position Job
9.6 years ago Thomas Girke ★ 1.7k
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RCytoscape: tudelft.CytoscapeRPC.CytoscapeRPCCallHandler: width is too small
SystemsBiology Network RCytoscape SystemsBiology Network RCytoscape
10.3 years ago Paul Shannon ▴ 750
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Adding Illumina GEO GPL IDs to IlluminaIDMapping?
SystemsBiology lumi SystemsBiology lumi
updated 13.2 years ago by 21k • written 13.2 years ago by ★ 1.2k
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SPIA, hacked to run with only selected pathways
SystemsBiology Pathways Cancer SPIA SystemsBiology Pathways Cancer SPIA
14.4 years ago Tarca, Adi ▴ 570
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Median-Interquartile Normalization
Microarray SystemsBiology Annotation GO Preprocessing Clustering Cancer Yeast Organism GO
16.5 years ago McGee, Monnie ▴ 300
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1.0k
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slow graph methods
SystemsBiology graph SystemsBiology graph
updated 16.6 years ago by ★ 7.4k • written 16.6 years ago by 25k
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biomaRt -> XML::addNode masks graph
SystemsBiology Cancer graph biomaRt SystemsBiology Cancer graph biomaRt
16.6 years ago Seth Falcon ★ 7.4k
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limma question: direct two-color design & modeling individual subject effects
SystemsBiology Regression probe limma SystemsBiology Regression probe limma
updated 17.0 years ago by ★ 1.1k • written 17.0 years ago by 50k
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RBGL, shortest paths, edge weights, and the new graph class
SystemsBiology graph RBGL SystemsBiology graph RBGL
18.0 years ago Seth Falcon ★ 7.4k
17 results • Page 1 of 1
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Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions by Michael Love 41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Answer: ATACseq merge peaks by ATpoint ★ 4.0k
That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…
Votes
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
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