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3.2k

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deseq2 ruvseq spike-in time course time series

updated 6.4 years ago by davide risso ▴ 950 • written 6.4 years ago by staceyborrego ▴ 20

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3.2k

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limma design model.matrix time series splines

updated 5.3 years ago by Aaron Lun ★ 28k • written 5.3 years ago by tleona3 • 0

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2.2k

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deseq2 time series time course

updated 3.7 years ago by Michael Love 42k • written 3.7 years ago by bsierieb ▴ 10

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2.0k

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deseq2 Time Series Gene Clustering LRT ATACseq

updated 5.2 years ago by Michael Love 42k • written 5.2 years ago by kaiser.karim • 0

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1.8k

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rna-seq time series patient limma-voom

updated 5.6 years ago by Aaron Lun ★ 28k • written 5.7 years ago by aec ▴ 90

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1.5k

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limma microarray time series DEG paired

updated 4.6 years ago by Gordon Smyth 50k • written 4.6 years ago by kawess • 0

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1.3k

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deseq2 time series remove batch effect

5.2 years ago Nicola • 0

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1.3k

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deseq2 time series multiple factor design

updated 5.4 years ago by Michael Love 42k • written 5.5 years ago by Jane • 0

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1.0k

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limma time series help

updated 5.3 years ago by Aaron Lun ★ 28k • written 5.3 years ago by rm1238 • 0

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868

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transcriptomics gene expression time series plant biology circadian Job

4.6 years ago dezer ▴ 10

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842

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deseq2 rnaseq repeated measures time series design formula

updated 4.3 years ago by Michael Love 42k • written 4.3 years ago by Dorien ▴ 10

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666

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scRNA-seq time series

3.8 years ago Bogdan ▴ 670

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Answer: Recovering my account credentials on Bioconductor by shepherl 3.9k

As we will need to exchange some information can you please contact me at bioconductorcoreteam@gmail.com and I can better assist you. Che…

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Hervé Pagès 16k

Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …

Comment: Help with running egsea() by James W. MacDonald 65k

Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…

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Answer: How to save the DEXSeq results

Answer: minfi support of illumina Infinium methylationEPIC v2.0

Comment: minfi support of illumina Infinium methylationEPIC v2.0

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Help with running egsea()

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