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News: Bioconductor Course, Kenya 2025: Applications Open!
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News: RNA-seq analysis with Bioconductor Carpentries workshop, Boston, Jul 31-Aug 1
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2.8 years ago Maria Doyle ▴ 110
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News: Include your Bioconductor tutorial in Smörgåsbord 2023, May 22-26!
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2.8 years ago Maria Doyle ▴ 110
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News: Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
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2.8 years ago Maria Doyle ▴ 110
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News: BioCAsia, 5-6th December 2019, Sydney, Australia
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News: BioCAsia, 29-30th November 2018, Melbourne, Australia
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News: LAST CHANCE: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
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8.0 years ago mnchoi67 ▴ 40
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News: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
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8.1 years ago mnchoi67 ▴ 40
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News: Course: Statistics and Computing in Genome Data Science, July 10-15, 2016
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10.0 years ago Martin Morgan 25k
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Help with neuroblastoma working group
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Job: Services/Outreach orientend bioinformatics positions at EMBL - Heidelberg
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11.0 years ago Wolfgang Huber ★ 13k
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News: NGS data analysis training courses at EMBL-EBI
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11.1 years ago gr231 ▴ 10
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Beginner's guide to DESeq2 pdf link broken
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updated 11.3 years ago by 43k • written 11.3 years ago by • 0
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News: Course Announcement - Next Generation Data Analysis with R/Bioc (Dec 5-8, 2014)
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11.3 years ago Thomas Girke ★ 1.7k
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Comment: Deseq2 DE analysis of host-pathogen samples (model separately or jointly?) by a2a2ddrhaa • 0
For those taking a break from the lab, the CT777 Game download https://ct7777.pk/ offers a high-performance entry into online mobile gaming…
Answer: Subsetting data verses contrasts [DESeq2]? by ATpoint ★ 5.0k
This has been asked many times before, please search for relevant posts. In short: Generally it is least tedious to not split the data and …
Comment: Bulk RNAseq analysis for by Mariami • 0
Thank you so much for your help! will try to proceed with the suggestion
Comment: Bulk RNAseq analysis for by Mariami • 0
Thank you for the explanation. I understand, although at the moment we are limited in our ability to increase N. My concern came from the o…
Answer: Bulk RNAseq analysis for by Gordon Smyth 53k
All three packages allow paired comparisons, where the clone is the "pair". limma moreover allows mixed models (just run `voomLmFit` with `…
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Comment: Are transformed values from rlog /vst log2 normalized counts?
Are transformed values from rlog /vst log2 normalized counts?
Answer: Bulk RNAseq analysis for
Answer: DiffBind differential analysis
Answer: Limma-voom sample weights and impact on DEG numbers
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