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blast
•
reset
0
votes
0
replies
638
views
Visualize blastx output in R
blast
2.8 years ago
kvigil
• 0
1
vote
2
replies
1.8k
views
blastn for selected database and/or organism
blast
blastsequences
updated 7.5 years ago by
James W. MacDonald
68k • written 7.5 years ago by
aush
▴ 40
0
votes
0
replies
1.3k
views
batch blast matrix of protein sequences from R
R
blast
blastsequences
protein
7.8 years ago
andres.susrud
• 0
1
vote
2
replies
2.7k
views
blastSequences queries failing due to BLAST switch to https?
annotate
blastSequences
BLAST
https
updated 9.1 years ago by
Martin Morgan
25k • written 9.1 years ago by
ariel.hecht
• 0
3
votes
8
replies
10.0k
views
Which package to run blast
blast
updated 9.3 years ago by
Malcolm Cook
★ 1.6k • written 9.3 years ago by
biomiha
▴ 20
0
votes
0
replies
1.1k
views
After mapping one Sanger sequence read (about 900bp) to hg19 using blastn, How can I get variants presented as reference-based position and base ch…
Biostrings
blast
variantannotation
9.3 years ago
li lilingdu
▴ 450
0
votes
1
reply
2.1k
views
Primer-blast with bioconductor packages
primer
blast
updated 9.5 years ago by
Hervé Pagès
16k • written 9.5 years ago by
Vinicius Henrique da Silva
▴ 40
0
votes
5
replies
7.2k
views
Blastp - through R
blast
R
9.8 years ago
maahpishanu
• 0
4
votes
13
replies
5.9k
views
How to create an output file with sequence ID's from multiple BLAST result using blastSequences in "Biostrings"
annotation
blast
biostrings
updated 10.4 years ago by
Martin Morgan
25k • written 10.4 years ago by
Mathilde
• 0
2
votes
2
replies
2.3k
views
BLAST export library 'annotate'
blast
annotate
biostrings
export
fasta
11.0 years ago
b.stielow
• 0
4
votes
3
replies
5.7k
views
Use R/Bioconductor to match BLAST hits to GO terms?
GO
BLAST
annotation
updated 11.1 years ago by
Marc Carlson
★ 7.2k • written 11.1 years ago by
Jon Bråte
▴ 270
11 results • Page
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Comment: featureCounts -L: high unassigned:mapq fraction
by
insurancetaaddddaxrealty
• 0
FeatureCounts can behave differently with ONT cDNA BAM files due to long read splice patterns, and many users compare settings or presets m…
Comment: A problem occurs when running the monocle2
by
e.j.aaw.g.erm
• 0
For gamers facing technical issues or errors in complex scripts, the Redz Hub script download provides a reliable tool to optimize performa…
Answer: How can I correctly use phyloseq with Docker?
by
Kevin Blighe
★ 4.0k
The Bioconductor version must be compatible with the R version. Bioconductor version 3.18 is compatible with R version 4.3. The Dockerfile …
Answer: Boolean Gate Combination for Any 2 Positive Events in flowWorkspace
by
Kevin Blighe
★ 4.0k
Your proposed code is correct and will achieve the desired outcome. The boolean filter expression `IFNg & TNFa | IFNg & IL2 | TNFa & IL2` i…
Answer: Guidance Requested on GCN Network Analysis and Module Enrichment in R
by
Kevin Blighe
★ 4.0k
The discrepancy between `final_exp1` and `final_exp2` could arise from several factors, despite matching dimensions. The `identical()` func…
Votes
Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Identifying differentially expressed genes in individual samples from a large co
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