Showing : blast • reset
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Visualize blastx output in R
blast
2.9 years ago kvigil • 0
1
vote
2
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1.9k
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blastn for selected database and/or organism
blast blastsequences
updated 7.7 years ago by 68k • written 7.7 years ago by ▴ 40
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1.3k
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batch blast matrix of protein sequences from R
R blast blastsequences protein
8.0 years ago andres.susrud • 0
1
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2
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2.8k
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blastSequences queries failing due to BLAST switch to https?
annotate blastSequences BLAST https
updated 9.3 years ago by 25k • written 9.3 years ago by • 0
3
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8
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10k
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Which package to run blast
blast
updated 9.4 years ago by ★ 1.6k • written 9.4 years ago by ▴ 20
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0
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After mapping one Sanger sequence read (about 900bp) to hg19 using blastn, How can I get variants presented as reference-based position and base ch…
Biostrings blast variantannotation
9.4 years ago li lilingdu ▴ 450
0
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1
reply
2.2k
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Primer-blast with bioconductor packages
primer blast
updated 9.7 years ago by 16k • written 9.7 years ago by ▴ 40
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5
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7.4k
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Blastp - through R
blast R
10.0 years ago maahpishanu • 0
4
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13
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6.2k
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How to create an output file with sequence ID's from multiple BLAST result using blastSequences in "Biostrings"
annotation blast biostrings
updated 10.5 years ago by 25k • written 10.5 years ago by • 0
2
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2
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2.4k
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BLAST export library 'annotate'
blast annotate biostrings export fasta
11.2 years ago b.stielow • 0
4
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3
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5.8k
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Use R/Bioconductor to match BLAST hits to GO terms?
GO BLAST annotation
updated 11.3 years ago by ★ 7.2k • written 11.3 years ago by ▴ 270
11 results • Page 1 of 1
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Answer: Are individual-mouse-based statistics possible in CellChat? by ATpoint ★ 5.0k
Not a Bioconductor package, I commented on the crosspost at https://www.biostars.org/p/9617271/
Comment: DESeq2 - how to shrink LFC for pairwise comparisons having multiple groups by ATpoint ★ 5.0k
apeglm is more cumbersome than ashr as with apeglm the coefficients need to be explicitely available in the resultsNames.So, you need to re…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Martin Morgan 25k
I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
Given that this is an issue with BiocParallel on your machine and we have a minimal reproducible example, you may want to repost the issue.…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0
Still happening using pre-existing size factors estimating dispersions gene-wise dispersion estimates: 15 workers mean-dis…
Votes
A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen
Comment: limpa analysis advice
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
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