Bioconductor Blast

Showing : blast • reset

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626

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blast

2.7 years ago kvigil • 0

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1.8k

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blast blastsequences

updated 7.5 years ago by James W. MacDonald 68k • written 7.5 years ago by aush ▴ 40

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1.3k

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R blast blastsequences protein

7.8 years ago andres.susrud • 0

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annotate blastSequences BLAST https

updated 9.1 years ago by Martin Morgan 25k • written 9.1 years ago by ariel.hecht • 0

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9.9k

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blast

updated 9.2 years ago by Malcolm Cook ★ 1.6k • written 9.2 years ago by biomiha ▴ 20

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1.1k

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Biostrings blast variantannotation

9.2 years ago li lilingdu ▴ 450

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2.1k

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primer blast

updated 9.5 years ago by Hervé Pagès 16k • written 9.5 years ago by Vinicius Henrique da Silva ▴ 40

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7.2k

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blast R

9.7 years ago maahpishanu • 0

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5.9k

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annotation blast biostrings

updated 10.3 years ago by Martin Morgan 25k • written 10.3 years ago by Mathilde • 0

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2.3k

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blast annotate biostrings export fasta

11.0 years ago b.stielow • 0

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5.7k

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GO BLAST annotation

updated 11.1 years ago by Marc Carlson ★ 7.2k • written 11.1 years ago by Jon Bråte ▴ 270

11 results • Page 1 of 1

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Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k

I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112

Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k

we can investigate this issue. thank you for bringing it to our attention

Comment: deseq2 filter the low counts by Michael Love 43k

> But within each comparison (contrast), if I trace some DEGs back to the original salmon merged gene counts (or even to normalised counts)…

Comment: deseq2 filter the low counts by empty_mt • 0

Thank you for you suggestion to look at the pre-filtering section in the DESeq2 vignettes - am I missing something? I have 6 treatments, …

Comment: deseq2 filter the low counts by Michael Love 43k

Have you seen this part: https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#pre-filtering

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Bioconductor 3.22 Released!

Comment: "Watched Tags" are being erased rather than updated

Comment: deseq2 filter the low counts

Answer: DESeq2 interactions

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