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boxplot
•
reset
2
votes
6
replies
398
views
How to make boxplot with pairwise and overall p value from Limma
t.test
boxplot
limma
anova
26 days ago
Chris
• 0
0
votes
1
reply
567
views
How to add pvalue to boxplot?
boxplot
ggplot2
updated 15 months ago by
ATpoint
★ 4.1k • written 15 months ago by
Sooni
▴ 10
0
votes
5
replies
793
views
knitr error in sort.int - unable to knit a chunk with boxplot codes
knitr
boxplot
updated 4.3 years ago by
James W. MacDonald
65k • written 4.3 years ago by
poojitha.stemcell
▴ 10
0
votes
1
reply
999
views
boxplot Error in Bioconductor
boxplot
bioconductor
R
error
4.4 years ago
l154359
• 0
2
votes
3
replies
1.4k
views
Boxplot function not showing all reads length on x-axis
boxplot
reads
fastq
sequencing
rsubread
updated 4.9 years ago by
Wei Shi
★ 3.6k • written 4.9 years ago by
Raito92
▴ 60
0
votes
0
replies
732
views
How to color samples in boxplot based on treatment or control using covdesc file
affy
boxplot
5.1 years ago
pratikshasharma47
• 0
1
vote
1
reply
661
views
Boxplot of merged data set ,colored according to control vs treatment
boxplot
affymetrix data
diferential expression
5.1 years ago
pratikshasharma47
• 0
2
votes
2
replies
664
views
Boxplot object (from the RNASeqGeneEdgeRQL workflow) returning a blank file...
boxplot
software error
updated 5.1 years ago by
Gordon Smyth
50k • written 5.1 years ago by
Raito92
▴ 60
7
votes
11
replies
4.9k
views
Comparing means of VST tranformed RNA-Seq counts in different groups of samples with boxplots
VST
deseq2
boxplot
rnaseq
updated 5.9 years ago by
Michael Love
41k • written 5.9 years ago by
Konstantinos Yeles
▴ 80
0
votes
2
replies
982
views
understanding the meaning boxplot
boxplot
updated 7.1 years ago by
Peter Langfelder
★ 3.0k • written 7.1 years ago by
farahqureshi5
• 0
0
votes
4
replies
4.5k
views
error in sort.int , 'x' must be atomic in affy::boxplot
affy package
boxplot
hgu133plus2
oligo package
updated 7.2 years ago by
James W. MacDonald
65k • written 7.2 years ago by
Javier Pérez Florido
▴ 840
1
vote
4
replies
2.0k
views
EdgeR differentially expressed genes vs normal boxplot visualization
edgeR
boxplot
7.2 years ago
snowru
• 0
3
votes
10
replies
2.0k
views
Shifted dashed frame in Gviz boxplot
gviz
boxplot
updated 8.0 years ago by
florian.hahne@novartis.com
★ 1.6k • written 8.0 years ago by
enricoferrero
▴ 660
1
vote
8
replies
1.7k
views
boxplot, microarray, hugene 2.0 st
boxplot
microarray
pd.hugene.2.0.st
9.1 years ago • updated 9.0 years ago
kanacska
▴ 10
0
votes
2
replies
1.2k
views
boxplot on an Rle object?
Rle
boxplot
9.3 years ago
Johannes Rainer
★ 2.0k
15 results • Page
1 of 1
Recent ...
Replies
Comment: SGSeq: moving toward diffex from SGSeq analysis
by
Sara
• 0
Thank you for your response. I have another question about saving the sgvc result as a CSV file. I would appreciate your help, please. ``` …
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I tried different block lengths first and considered 100000 to be ideal because of the almost similar inter-range distance. S1= bootRange…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
The segmentation and block length are key parameters. We recommend for example blocks of length ~500kb. It would help if you would post yo…
Answer: Handling multiple differential expression comparisons
by
Michael Love
41k
It's typical that results are presented with each group having its own FDR control. So presenting each comparison with the adjusted p-va…
Comment: Too many significant genes when integrating gtex and tcga
by
ATpoint
★ 4.1k
These two datasets are from completely different experiments / batches. It is utterly meaningless to compare them. I would suggest comparat…
Votes
Print Differentially Expressed Exons From Dexseq Results
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
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