Showing : classification • reset
0
votes
0
replies
781
views
Job: Two Bioinformatics Fellowship Positions at US EPA
bioinformatics toxicology Job sequenicng statistics
3.8 years ago • updated 3.5 years ago whduke • 0
3
votes
2
replies
1.1k
views
Using deseq2 with batch effects and classification as downstream analysis
deseq2 batch effect classification
updated 5.6 years ago by 42k • written 5.6 years ago by • 0
1
vote
5
replies
1.2k
views
CRImage createTrainingSet package is not available to install
classification segmentation cell types image analysis crimage
5.8 years ago Jenny.chien • 0
0
votes
0
replies
801
views
NMF pre-processsing effect on classification
NMF log2 classification bioconductor
5.9 years ago Seymoo • 0
0
votes
1
reply
1.1k
views
Classification with large number of qualitative variables
R classification qualitative variables high dimensionnal
updated 7.5 years ago by ▴ 130 • written 7.5 years ago by • 0
0
votes
0
replies
989
views
Help in interpreting the plot of the function plotRLDF in limma package for microarray dataset concerning two categorical classes
limma plotRLDF microarray classification linear discriminant function
8.0 years ago svlachavas ▴ 830
0
votes
1
reply
1.1k
views
Questions about the correct implementation of the function plotRLDF from R package limma regarding classification of a microarray dataset
limma microarray plotRLDF classification
8.0 years ago svlachavas ▴ 830
0
votes
0
replies
730
views
Package for classifying two classes of sequences using hidden markov models?
hmm classification
8.1 years ago vinod.acear ▴ 50
1
vote
1
reply
2.3k
views
edgeR GLM fitted values
edgeR GLM classification rnaseq
updated 8.2 years ago by ★ 28k • written 8.2 years ago by ▴ 10
1
vote
2
replies
1.6k
views
Possible methodologies of machine learning in R that can assimilate continuous variables along gene expression data for microarray classification
classification machinelearning microarray multivariate caret
updated 8.6 years ago by ★ 13k • written 8.6 years ago by ▴ 830
0
votes
0
replies
1.4k
views
Error in R package "cancerclass" with function nvalidate
cancerclass bioconductor machinelearning classification
9.1 years ago svlachavas ▴ 830
0
votes
2
replies
1.1k
views
Ranked genes generated by learning datasets and Differentially expressed genes generated by original data
Classification Classification
updated 9.8 years ago by 21k • written 9.8 years ago by ★ 13k
0
votes
3
replies
1.5k
views
Suitable learning sets, gene selection methods and classification methods for low replicated microarray samples
Classification CMA Classification CMA
updated 9.8 years ago by 21k • written 9.8 years ago by ★ 13k
0
votes
0
replies
1.1k
views
Course "CSAMA 2014" Computational Statistics for Genome Biology
Annotation Classification Clustering Annotation Classification Clustering
10.0 years ago Wolfgang Huber ★ 13k
0
votes
3
replies
1.5k
views
MLSeq Mathematical Concepts
Classification edgeR DESeq MLSeq Classification edgeR DESeq MLSeq
updated 10.1 years ago by ★ 13k • written 10.1 years ago by ★ 1.5k
0
votes
1
reply
1.6k
views
Support vector regression
Classification Regression Classification Regression
updated 10.2 years ago by ★ 13k • written 10.2 years ago by ★ 13k
0
votes
0
replies
1.1k
views
CSAMA 2014: Computational Statistics for Genome Biology - June 22-27, 2014
Sequencing Annotation Classification Clustering Sequencing Annotation Classification
10.2 years ago Wolfgang Huber ★ 13k
0
votes
0
replies
1.4k
views
CfP: CAMDA 2013 - 12th International Conference on Critical Assessment of Massive Data Analysis
Genetics Classification Regression Genetics Classification Regression
11.1 years ago CAMDA 2013 ▴ 30
0
votes
0
replies
1.1k
views
CAMDA 2013 Challenge: Big Data in Life Sciences
Sequencing Microarray Genetics Classification Clustering Regression Sequencing Microarray
11.2 years ago CAMDA 2013 ▴ 30
0
votes
5
replies
3.2k
views
DESeq2
Normalization Classification Clustering DESeq cqn DESeq2 Normalization Classification cqn
updated 11.2 years ago by 42k • written 11.2 years ago by ★ 13k
0
votes
0
replies
2.1k
views
Bioconductor Digest, Vol 121, Issue 13
RNASeq Microarray Normalization GO Classification Clustering Cancer Mus musculus probe GO
11.2 years ago Matthew Thornton ▴ 360
0
votes
3
replies
3.0k
views
Subsetting expression sets for mass spec data - second ask
Classification Cancer PROcess Classification Cancer PROcess
updated 11.5 years ago by 21k • written 11.5 years ago by ▴ 300
0
votes
3
replies
2.9k
views
PAMR- Package: Workflow and/or other methods
Classification Classification
updated 11.5 years ago by 21k • written 11.5 years ago by ▴ 70
0
votes
0
replies
1.5k
views
Classification in Mass Spectrometry Data
Microarray Classification Cancer Ovarian PROcess MLInterfaces ASSIGN Microarray Cancer
11.5 years ago McGee, Monnie ▴ 300
0
votes
0
replies
958
views
Questions regarding MCRestimate package
Classification MCRestimate Classification MCRestimate
11.8 years ago Guest User ★ 13k
0
votes
0
replies
1.4k
views
Overlapping ROC plots
Classification ROC graph Classification ROC graph
11.9 years ago Yadav Sapkota ▴ 130
0
votes
0
replies
749
views
Question about MCRestimate
Classification Classification
12.0 years ago ZHENG FU ▴ 10
0
votes
5
replies
4.5k
views
probability of a point membership to a certain cluster
Classification Classification
updated 12.3 years ago by ★ 13k • written 12.3 years ago by ▴ 60
0
votes
0
replies
2.4k
views
'Empty model' error during Monte Carlo cross-validation of SVM classification with the CMA package
Microarray Classification limma CMA Microarray Classification limma CMA
13.3 years ago Santosh Patnaik ▴ 30
0
votes
4
replies
1.6k
views
RandomForest, supervised machine learning and uncertainty
GO Classification GO Classification
updated 13.5 years ago by 6.7k • written 13.5 years ago by ▴ 370
0
votes
0
replies
889
views
Fwd: question regarding to MLInterface
Network Classification Network Classification
13.5 years ago Vincent J. Carey, Jr. 6.7k
0
votes
0
replies
18k
views
1000 R tutorials/Links
Sequencing Microarray Genetics Visualization Network Bayesian Classification Clustering
14.0 years ago David Lyon ▴ 340
0
votes
0
replies
1.5k
views
R Course 28-29 March in Heidelberg (EMBL)
Classification Classification
14.3 years ago Wolfgang Huber ★ 13k
0
votes
3
replies
1.0k
views
HTqPCR and limma and factorial design with no replicates
Microarray qPCR Classification limma HTqPCR ASSIGN Microarray qPCR Classification limma
updated 14.3 years ago by ★ 6.0k • written 14.3 years ago by ▴ 810
0
votes
1
reply
1.5k
views
Seeking assistance on ROC
Microarray GO Classification ROC graph ASSIGN Microarray GO Classification ROC graph
updated 14.3 years ago by ★ 13k • written 14.3 years ago by 21k
0
votes
1
reply
1.1k
views
HTqPCR and limma and factorial design with no replicates
Microarray qPCR Classification limma HTqPCR ASSIGN Microarray qPCR Classification limma
updated 14.3 years ago by ★ 6.0k • written 14.3 years ago by ▴ 810
0
votes
0
replies
1.2k
views
compare function in CMA package
Classification CMA Classification CMA
14.3 years ago Javier Pérez Florido ▴ 840
0
votes
0
replies
1.2k
views
Statistical approach to compare differentiall expressed gene lists
Microarray Classification Microarray Classification
14.4 years ago qinghua xu ▴ 110
0
votes
0
replies
1.0k
views
回复： 回复： : Patent issues of classification algorithms
Microarray Classification Microarray Classification
14.4 years ago qinghua xu ▴ 110
0
votes
0
replies
727
views
转发： 回复： Patent issues of classification algorithms
Microarray Classification Cancer Microarray Classification Cancer
14.4 years ago Martin Morgan 25k
0
votes
1
reply
1.2k
views
Sample size estimation for independent validation set
Microarray Classification PROcess Microarray Classification PROcess
updated 14.5 years ago by ▴ 110 • written 14.5 years ago by ▴ 10
0
votes
1
reply
1.1k
views
classification method applied to microarrays (CMA package)
Classification CMA Classification CMA
updated 14.6 years ago by ▴ 10 • written 14.6 years ago by ▴ 190
0
votes
0
replies
1.3k
views
Post-doc bio-informatics in next generation sequencing (36 h) (VUMC - The Netherlands)
Sequencing Genetics Classification Cancer PROcess Sequencing Genetics Classification
14.6 years ago Reek, J. ▴ 10
0
votes
2
replies
1.1k
views
OT: van 't Veer (2002) classifier
Classification Cancer Breast Classification Cancer Breast
updated 14.8 years ago by ★ 1.3k • written 14.8 years ago by ▴ 110
0
votes
0
replies
1.5k
views
CMA package: variable selection with limma
Microarray Classification Regression limma CMA Microarray Classification Regression limma
15.2 years ago Renaud Gaujoux ▴ 170
0
votes
0
replies
1.5k
views
Correcting for covariate (very unbalanced design)
Microarray Classification limma Microarray Classification limma
15.5 years ago Renaud Gaujoux ▴ 170
0
votes
3
replies
1.6k
views
Bioconductor 2.3 is released
aCGH Sequencing miRNA Microarray Visualization Bayesian Classification Survival Yeast LPE
15.6 years ago Patrick Aboyoun ★ 1.6k
0
votes
3
replies
1.0k
views
Generating random gene lists: does sample/resample generate random sets
Classification Classification
15.7 years ago Scott Ochsner ▴ 300
0
votes
2
replies
1.7k
views
Generating random gene lists: does sample/resample generate random sets
Classification Classification
updated 15.7 years ago by ▴ 750 • written 15.7 years ago by ▴ 300
0
votes
0
replies
1.1k
views
Cluster and classification research ggrad students
Classification Classification
15.7 years ago William Shannon ▴ 280
50 results • Page 1 of 1
Recent ...
Replies
Comment: Slightly different count plots from R and spreadsheet by ATpoint ★ 4.1k
I don't think it is the purpose of the support site to debug Excel behaviour. The issue might be how it combines replicates into a single v…
Comment: Running ENmix with mouse methylation manifest: readidat error - Error in readman by Karosham.Reddy • 0
Hi, I am having the same issues. What was the typo that you found? And were you able to solve the next problem?
Comment: recount3 problem downloading data from source sra by PABLO ANTONIO • 0
Hello Leonardo, Thanks for commenting on possible solutions. I noticed comparing your session info that I was using the previous version o…
Comment: seqlevelsStyle() not working by websterdelacruz2087055 • 0
Specify the new URL new_url <- "https://hgdownload2.cse.ucsc.edu/goldenPath/hg19/database/chromInfo.txt.gz" Use the new URL to download th…
Comment: SGSeq: moving toward diffex from SGSeq analysis by Sara • 0
Yes, thank you. I have another error now, may you please guide me. here is the code that I used till using vep: ```r # bam_path <- "~/pat…
Votes
Including squared covariates to account for non-linear dependencies in differential gene expression analysis
DESeq2 DE gene expression of scRNA-seq pseudobulk
Answer: Multiple factor DSEq2 result generates weird volcano plot
DESeq2 for single cell pseudobulk processing
Simultaneously adding two different covariates in the model gives error in DESeq2.
Awards • All
Popular Question to abhisek001 • 0
Scholar to Mike Smith ★ 6.5k
Popular Question to mohammedtoufiq91 ▴ 10
Popular Question to Gordon Smyth 50k
Popular Question to bas_work ▴ 30
Locations • All
Bangladesh, just now
Germany, 6 minutes ago
Germany, 7 minutes ago
Germany, 9 minutes ago
Italy, 10 minutes ago
Traffic: 796 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6