Bioconductor Ggcyto

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ggcyto

updated 3.2 years ago by shepherl 4.3k • written 3.2 years ago by philippe.hauchamps ▴ 10

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1000

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FlowCytometry flowCore openCyto ggcyto

3.2 years ago Dennis.hinkel • 0

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1.3k

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ggcyto

updated 3.2 years ago by James W. MacDonald 68k • written 3.2 years ago by alex • 0

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ggcyto

3.3 years ago alex • 0

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FlowCytometry flowCore ggcyto

updated 3.3 years ago by SamGG ▴ 360 • written 3.3 years ago by alex • 0

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864

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ggcyto

3.8 years ago Robert Baer ▴ 70

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1.4k

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CytoML ggcyto cytoml

3.8 years ago FL • 0

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flowCore ggcyto FlowCytometryData

updated 4.3 years ago by Jiang, Mike ★ 1.3k • written 4.7 years ago by Elizabeth • 0

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software error flow cytometry ggcyto flowAI

updated 5.7 years ago by Kevin Blighe ★ 4.0k • written 5.7 years ago by Robert Baer ▴ 70

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2.6k

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ggcyto flowWorkspace flow cytometry flowjo

updated 5.7 years ago by Kevin Blighe ★ 4.0k • written 5.7 years ago by andrej.stoll.de ▴ 10

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1.7k

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ggcyto ggcyto_arrange autoplot

updated 5.7 years ago by Jake Wagner ▴ 310 • written 5.7 years ago by alavy ▴ 30

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2.1k

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flowcore ggcyto

updated 7.8 years ago by Jiang, Mike ★ 1.3k • written 7.8 years ago by Andrew Box ▴ 10

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1.2k

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ggcyto autoplot axis

8.0 years ago anders.tondell ▴ 30

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2.4k

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flowCore ggcyto

updated 9.0 years ago by Jiang, Mike ★ 1.3k • written 9.0 years ago by jaera • 0

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2.3k

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ggcyto

updated 9.1 years ago by Jiang, Mike ★ 1.3k • written 9.1 years ago by anders.tondell ▴ 30

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2.2k

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flowcore ggcyto

updated 10.0 years ago by Jiang, Mike ★ 1.3k • written 10.0 years ago by OT • 0

16 results • Page 1 of 1

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Answer: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by Gordon Smyth 53k

I think that some historical context will help here. Aaron Lun was a PhD student in my Lab back in 2015, and the analysis approach that he …

Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by Michael Love 43k

You just need the mouse identifier (controls baseline) and the group specific allelic effect.

Comment: limpa-blank normalization and Spectronaut's PTM stoichiometry by Julia Broadbent • 0

Hi Emily, Just sharing a resource for handling contaminants - we use the methods described in [Frankenfield et al. (2022)](https://pubs.acs…

Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by Michael Love 43k

You may want to speak with a local statistician, because you don't just want to find the first full rank matrix and run with that if it doe…

Comment: limpa-blank normalization and Spectronaut's PTM stoichiometry by Gordon Smyth 53k

It is fine for your mass spec facility to include blank samples as part of their internal QC, but such samples should not in my opinion be …

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A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen

Comment: limpa analysis advice

Answer: When to use edgeR or limma

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