Bioconductor Help

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bachelorthesis help HELP

updated 9 months ago by DrFizz • 0 • written 9 months ago by melander • 0

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DESeq2 HELP

14 months ago Michael • 0

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DESeq2 volcanoplot deseq HELP contrast

updated 14 months ago by Basti ▴ 780 • written 14 months ago by Michael • 0

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725

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ChIPpeakAnno Normalization EnrichedHeatmap HELP TxDb.Celegans.UCSC.ce11.refGene

18 months ago michela ▴ 20

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HELP HelloRanges

updated 18 months ago by James W. MacDonald 65k • written 18 months ago by michela ▴ 20

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HELP ChIC.data PeakDetection ChipOnChipData

19 months ago michela ▴ 20

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HELP Data

updated 20 months ago by Guido Hooiveld ★ 3.9k • written 20 months ago by mcclurejenniferc • 0

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STRINGdb HELP

updated 15 months ago by Rodrigo ▴ 10 • written 2.2 years ago by Jessica ▴ 10

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HELP ChIPpeakAnno

2.5 years ago lexi.kellington • 0

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help DESeq2 DESeqDataSetFromMatrix rownames

updated 23 months ago by Sanatan • 0 • written 3.1 years ago by dorina.jamniczky • 0

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RNASeqData RNASeq GEO RNASeqR HELP

3.1 years ago hgalmoore • 0

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help software error

updated 5.3 years ago by Martin Morgan 25k • written 5.3 years ago by mafusa20 • 0

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limma time series help

updated 5.3 years ago by Aaron Lun ★ 28k • written 5.3 years ago by rm1238 • 0

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clusterprofiler input files error help

updated 7.2 years ago by Guangchuang Yu ★ 1.2k • written 7.2 years ago by Mataivic • 0

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2.5k

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edger differential gene expression without replicate nested design help

updated 7.9 years ago by Aaron Lun ★ 28k • written 7.9 years ago by knipehf • 0

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R deseq2 differential gene expression help

7.9 years ago fischer87 • 0

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1.4k

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limma help

updated 8.4 years ago by svlachavas ▴ 830 • written 8.4 years ago by libya.tahani • 0

17 results • Page 1 of 1

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Comment: Couldn't connect to server while using "pathways" by ATpoint ★ 4.1k

Please understand that we neither can see your screen, nor read minds. You at least need to provide the line of code and the name of the pa…

Answer: Method to find pathways different between 2 groups by Gordon Smyth 50k

> When I search camera limma on pubmed, I found 2 papers I am unclear what point you are trying to make. limma's camera method has been fo…

Comment: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k

limma most certainly is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of …

Comment: package goseq seems to be not available on the latest version of R by Patrycja ▴ 20

limma package also isn't available.Is there any information when these packages will be available?

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…

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Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-

Handling multiple differential expression comparisons

Answer: fgsea significant result

package goseq seems to be not available on the latest version of R

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Scholar to ATpoint ★ 4.1k