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Showing :
makecdfenv
•
reset
0
votes
3
replies
2.4k
views
RE:proper pooling design
Microarray
Normalization
affy
makecdfenv
limma
marray
Microarray
Normalization
affy
limma
written 22.1 years ago by
Stephen Moore
▴ 70
2
votes
1
reply
607
views
Using Affymetrix Custom Array
ArrayExpress
makecdfenv
AffymetrixChip
gcrma
GeneExpression
updated 14 months ago by
James W. MacDonald
68k • written 14 months ago by
Piotr.Keller
• 0
0
votes
3
replies
2.2k
views
unable to install GenomeWideSNP_6 cdf
makecdfenv
bioclite
updated 8.6 years ago by
James W. MacDonald
68k • written 8.6 years ago by
vinaysbharadhwaj
• 0
2
votes
8
replies
5.5k
views
Clariom D Human Microarray CDF file to package
simpleaffy
makecdfenv
9.4 years ago
jayme.rickman
• 0
2
votes
4
replies
2.1k
views
Help with microarray analysis (forming cdf files)
microarray
affy
makecdfenv
updated 10.8 years ago by
James W. MacDonald
68k • written 10.8 years ago by
SSK
▴ 10
0
votes
4
replies
2.1k
views
error with makecdfenv package
Annotation
cdf
makecdfenv
oligo
xps
Annotation
cdf
makecdfenv
oligo
xps
updated 11.6 years ago by
cstrato
★ 3.9k • written 11.6 years ago by
James W. MacDonald
68k
0
votes
1
reply
2.1k
views
Reading MAGE-ML cdf into bioconductor for limma in R v. 3.0.2
Microarray
cdf
probe
makecdfenv
RMAGEML
ArrayExpress
Microarray
cdf
probe
makecdfenv
updated 11.9 years ago by
James W. MacDonald
68k • written 11.9 years ago by
Guest User
★ 13k
0
votes
0
replies
2.2k
views
Missing probesets when creating Affymetrix GeneChip miRNA 4.0 CDF package using makecdfenv package
miRNA
Annotation
cdf
makecdfenv
miRNA
Annotation
cdf
makecdfenv
12.1 years ago
Isaac Neuhaus
▴ 360
0
votes
0
replies
1.9k
views
Missing probesets when creating Affymetrix GeneChip miRNA 4.0 CDF package using makecdfenv package
miRNA
cdf
affy
makecdfenv
affxparser
miRNA
cdf
affy
makecdfenv
affxparser
12.1 years ago
James W. MacDonald
68k
1
vote
4
replies
3.6k
views
Missing probesets when creating Affymetrix GeneChip miRNA 4.0 CDF package using makecdfenv package
miRNA
Microarray
cdf
makecdfenv
miRNA
Microarray
cdf
makecdfenv
updated 12.1 years ago by
James W. MacDonald
68k • written 12.1 years ago by
Guest User
★ 13k
0
votes
3
replies
1.8k
views
R crashes when using CDF package generated using makecdfenv
cdf
makecdfenv
cdf
makecdfenv
updated 13.0 years ago by
Kasper Daniel Hansen
★ 6.5k • written 13.0 years ago by
Guest User
★ 13k
0
votes
2
replies
1.5k
views
Error message (probably) from AffyBatch.R when using a modified CDF
cdf
affy
makecdfenv
cdf
affy
makecdfenv
updated 13.1 years ago by
James W. MacDonald
68k • written 13.1 years ago by
Hugh Shanahan
▴ 50
0
votes
2
replies
1.5k
views
affy : ReadAffy() fails on HuGene-1_1-st-v1 chips
Microarray
cdf
affy
makecdfenv
PROcess
oligo
cycle
Microarray
cdf
affy
makecdfenv
oligo
updated 14.0 years ago by
James W. MacDonald
68k • written 14.0 years ago by
Groot, Philip de
▴ 630
0
votes
0
replies
1.6k
views
How to make a custom cdf file?
Annotation
cdf
probe
makecdfenv
Annotation
cdf
probe
makecdfenv
14.1 years ago
Olivier Lucas
▴ 40
0
votes
0
replies
1.2k
views
a question about getCdfInfo package in GCRMA, thanks for your help.
Annotation
cdf
makecdfenv
Annotation
cdf
makecdfenv
14.3 years ago
boczniak767
▴ 740
0
votes
0
replies
1.4k
views
[R] make.cdf.package: Error: cannot allocate vector of size 1 Kb
Cancer
cdf
affy
makecdfenv
Cancer
cdf
affy
makecdfenv
16.1 years ago
James W. MacDonald
68k
0
votes
1
reply
1.4k
views
problem in make.cdf.package of MoGene-1_0-st-v1.r3.CDF
cdf
makecdfenv
cdf
makecdfenv
updated 16.4 years ago by
Benilton Carvalho
★ 4.3k • written 16.4 years ago by
Peng Yu
▴ 950
0
votes
2
replies
1.6k
views
Creating Custom CDF
cdf
makecdfenv
cdf
makecdfenv
updated 16.6 years ago by
James W. MacDonald
68k • written 16.6 years ago by
naresh kumar
▴ 40
0
votes
2
replies
1.7k
views
Using Affymetrix PM chips with Bioconductor
Annotation
cdf
probe
makecdfenv
Annotation
cdf
probe
makecdfenv
updated 16.9 years ago by
Ben Bolstad
★ 1.2k • written 16.9 years ago by
James Mcininch
▴ 20
0
votes
2
replies
1.5k
views
Creating Affymetrix CDF files
cdf
probe
makecdfenv
convert
cdf
probe
makecdfenv
convert
updated 17.1 years ago by
Kasper Daniel Hansen
★ 6.5k • written 17.1 years ago by
Mehmet Somel
▴ 20
0
votes
2
replies
1.4k
views
makecdfenv crashes
cdf
affy
makecdfenv
cdf
affy
makecdfenv
updated 17.2 years ago by
James W. MacDonald
68k • written 17.2 years ago by
Skewes,Aaron
▴ 60
0
votes
1
reply
1.7k
views
Prokaryotic_Rhodobacter capsulatus GEP
Epigenetics
cdf
affy
makecdfenv
plier
affxparser
preprocessCore
Epigenetics
cdf
affy
updated 17.2 years ago by
dorothyc
▴ 140 • written 17.2 years ago by
James W. MacDonald
68k
0
votes
1
reply
1.1k
views
gcrma problem
cdf
affy
makecdfenv
gcrma
cdf
affy
makecdfenv
gcrma
updated 17.5 years ago by
James W. MacDonald
68k • written 17.5 years ago by
Glyn Bradley
▴ 40
0
votes
5
replies
1.7k
views
makecdfenv and multi-mapping probes on Mouse Gene 1.0 ST array
cdf
probe
makecdfenv
cdf
probe
makecdfenv
updated 17.8 years ago by
Sean Davis
21k • written 17.8 years ago by
Heidi Dvinge
★ 2.0k
0
votes
1
reply
1.3k
views
affyPLM and exon array question
cdf
affy
makecdfenv
affyPLM
cdf
affy
makecdfenv
affyPLM
updated 18.4 years ago by
Ben Bolstad
★ 1.2k • written 18.4 years ago by
Henrik Bengtsson
★ 2.4k
0
votes
1
reply
1.1k
views
error in makecdfenv
makecdfenv
makecdfenv
updated 18.4 years ago by
James W. MacDonald
68k • written 18.4 years ago by
Yan Zhang
▴ 130
0
votes
2
replies
1.5k
views
how to make probe environments for use with GCRMA
cdf
makecdfenv
gcrma
cdf
makecdfenv
gcrma
updated 18.6 years ago by
claire
▴ 50 • written 18.6 years ago by
Wittner, Ben
▴ 290
0
votes
9
replies
2.6k
views
gcrma error? - linked to makeProbePackage ?
cdf
probe
affy
makecdfenv
gcrma
matchprobes
cdf
probe
affy
makecdfenv
gcrma
matchprobes
updated 18.6 years ago by
James W. MacDonald
68k • written 18.6 years ago by
Benoit Ballester
▴ 90
0
votes
6
replies
1.6k
views
mas5calls with make.cdf.env
cdf
probe
makecdfenv
cdf
probe
makecdfenv
updated 18.7 years ago by
James W. MacDonald
68k • written 18.7 years ago by
Lana Schaffer
★ 1.3k
0
votes
3
replies
2.1k
views
CDF package in R (windows)
cdf
affy
makecdfenv
cdf
affy
makecdfenv
18.7 years ago
Salim Charaniya
▴ 20
0
votes
4
replies
2.4k
views
affyPLM and exon array question
cdf
affy
makecdfenv
affyPLM
cdf
affy
makecdfenv
affyPLM
updated 18.8 years ago by
Ben Bolstad
★ 1.2k • written 18.8 years ago by
Allen Day
▴ 30
0
votes
1
reply
1.4k
views
making a cdf file for expression analysis on a tiling array
cdf
affy
makecdfenv
cdf
affy
makecdfenv
updated 19.0 years ago by
Sean Davis
21k • written 19.0 years ago by
Ivan Baxter
▴ 60
0
votes
0
replies
1.1k
views
(no subject)
cdf
affy
makecdfenv
convert
cdf
affy
makecdfenv
convert
19.1 years ago
Charlyn Suarez
▴ 10
0
votes
4
replies
1.6k
views
makecdfenv
cdf
makecdfenv
cdf
makecdfenv
updated 19.2 years ago by
Martin Morgan
25k • written 19.2 years ago by
Wolfgang Huber
★ 13k
0
votes
1
reply
1.5k
views
warning from make.cdf.package - FYI
GO
Survival
cdf
Biobase
annotate
genefilter
graph
makecdfenv
limma
gcrma
matchprobes
GO
updated 19.3 years ago by
James W. MacDonald
68k • written 19.3 years ago by
Jenny Drnevich
★ 2.2k
0
votes
5
replies
2.5k
views
Importing CDF file for custom array using makecdfenv
Microarray
GO
Survival
Cancer
cdf
Biobase
annotate
genefilter
affy
graph
makecdfenv
GO
updated 19.3 years ago by
Sung-Chur Sim
▴ 20 • written 19.3 years ago by
Jenny Drnevich
★ 2.2k
0
votes
5
replies
2.1k
views
Affymetrix Promoter tiling array
cdf
makecdfenv
cdf
makecdfenv
19.5 years ago
Wu, Xiwei
▴ 350
0
votes
1
reply
1.3k
views
new user trying to create a cdf package for custom array
cdf
probe
affy
makecdfenv
cdf
probe
affy
makecdfenv
updated 19.5 years ago by
James W. MacDonald
68k • written 19.5 years ago by
Schwartz, Donald
▴ 20
0
votes
2
replies
3.0k
views
Importing CDF file for custom array using makecdfenv
cdf
affy
makecdfenv
cdf
affy
makecdfenv
updated 19.5 years ago by
Michal Okoniewski
▴ 120 • written 19.5 years ago by
Ann Hess
▴ 340
0
votes
0
replies
1.0k
views
makecdfenv, bg.correct
affy
makecdfenv
affy
makecdfenv
19.8 years ago
Justin Borevitz
▴ 170
0
votes
1
reply
1.1k
views
Fusarium CDF
cdf
makecdfenv
cdf
makecdfenv
updated 19.8 years ago by
James W. MacDonald
68k • written 19.8 years ago by
Heather Erika Hallen
▴ 30
0
votes
1
reply
1.4k
views
Small bug in function 'countskip.FASTA.entries' from package 'altcdfenvs'
probe
affy
makecdfenv
matchprobes
altcdfenvs
probe
affy
makecdfenv
matchprobes
altcdfenvs
updated 20.2 years ago by
lgautier@altern.org
▴ 950 • written 20.3 years ago by
Norman Pavelka
▴ 190
0
votes
0
replies
1.3k
views
How do I install custom made CDF in Bioconductor
cdf
makecdfenv
cdf
makecdfenv
20.5 years ago
Ruppert Valentino
▴ 270
0
votes
1
reply
941
views
makecdfenv makePlatformDesign bigendian
makecdfenv
makePlatformDesign
makecdfenv
makePlatformDesign
updated 20.5 years ago by
Seth Falcon
★ 7.4k • written 20.5 years ago by
Tim Strom
▴ 30
0
votes
1
reply
1.3k
views
affymetrix CDF file problem
cdf
makecdfenv
cdf
makecdfenv
updated 20.7 years ago by
James W. MacDonald
68k • written 20.7 years ago by
Karin Lagesen
▴ 80
0
votes
3
replies
1.7k
views
Working flow_own CEL file reading problem
Normalization
cdf
affy
makecdfenv
Normalization
cdf
affy
makecdfenv
updated 20.7 years ago by
James W. MacDonald
68k • written 20.7 years ago by
Junshi Yazaki
▴ 40
0
votes
0
replies
1.1k
views
make own CDF package probelm, error:couldn't find function "make.cdf.env"
cdf
probe
makecdfenv
cdf
probe
makecdfenv
20.7 years ago
Seth Falcon
★ 7.4k
0
votes
0
replies
1.1k
views
make own CDF package probelm, error:couldn't find function "make.cdf.env"
Microarray
Cancer
cdf
probe
makecdfenv
Microarray
Cancer
cdf
probe
makecdfenv
20.7 years ago
James W. MacDonald
68k
0
votes
1
reply
1.1k
views
makecdfenv bug
GO
makecdfenv
GO
makecdfenv
updated 20.8 years ago by
Seth Falcon
★ 7.4k • written 20.8 years ago by
Cyrus Harmon
▴ 140
0
votes
2
replies
1.4k
views
Missing probesets
cdf
affy
makecdfenv
cdf
affy
makecdfenv
updated 20.8 years ago by
rgentleman
★ 5.5k • written 20.8 years ago by
Malick.PAYE@eu.biomerieux.com
▴ 110
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